Protein–RNA interactions for Protein: Q6PJG9

LRFN4, Leucine-rich repeat and fibronectin type-III domain-containing protein 4, humanhuman

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4Q6PJG9 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRFN4Q6PJG9 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
LRFN4Q6PJG9 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRFN4Q6PJG9 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LRFN4Q6PJG9 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRFN4Q6PJG9 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRFN4Q6PJG9 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC17.95■□□□□ 0.46
LRFN4Q6PJG9 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LRFN4Q6PJG9 ME2-218ENST00000640965 2476 ntTSL 5 BASIC17.95■□□□□ 0.46
LRFN4Q6PJG9 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRFN4Q6PJG9 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRFN4Q6PJG9 GCK-205ENST00000437084 1385 ntTSL 5 BASIC17.95■□□□□ 0.46
LRFN4Q6PJG9 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.95■□□□□ 0.46
LRFN4Q6PJG9 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.95■□□□□ 0.46
LRFN4Q6PJG9 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC17.95■□□□□ 0.46
LRFN4Q6PJG9 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LRFN4Q6PJG9 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC17.95■□□□□ 0.46
LRFN4Q6PJG9 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRFN4Q6PJG9 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC17.95■□□□□ 0.46
LRFN4Q6PJG9 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC17.95■□□□□ 0.46
LRFN4Q6PJG9 CROCCP5-201ENST00000436658 830 ntBASIC17.95■□□□□ 0.46
LRFN4Q6PJG9 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LRFN4Q6PJG9 AC093787.1-201ENST00000450396 207 ntBASIC17.95■□□□□ 0.46
LRFN4Q6PJG9 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC17.95■□□□□ 0.46
LRFN4Q6PJG9 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC17.95■□□□□ 0.46
LRFN4Q6PJG9 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
LRFN4Q6PJG9 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
LRFN4Q6PJG9 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.95■□□□□ 0.46
LRFN4Q6PJG9 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRFN4Q6PJG9 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC17.95■□□□□ 0.46
LRFN4Q6PJG9 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRFN4Q6PJG9 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC17.95■□□□□ 0.46
LRFN4Q6PJG9 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC17.95■□□□□ 0.46
LRFN4Q6PJG9 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRFN4Q6PJG9 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRFN4Q6PJG9 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LRFN4Q6PJG9 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRFN4Q6PJG9 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRFN4Q6PJG9 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC17.94■□□□□ 0.46
LRFN4Q6PJG9 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRFN4Q6PJG9 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRFN4Q6PJG9 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LRFN4Q6PJG9 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LRFN4Q6PJG9 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
LRFN4Q6PJG9 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC17.94■□□□□ 0.46
LRFN4Q6PJG9 KRT18P68-201ENST00000392293 1000 ntBASIC17.94■□□□□ 0.46
LRFN4Q6PJG9 AL355472.2-201ENST00000422958 438 ntBASIC17.94■□□□□ 0.46
LRFN4Q6PJG9 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC17.94■□□□□ 0.46
LRFN4Q6PJG9 CYP2T3P-201ENST00000601990 817 ntBASIC17.94■□□□□ 0.46
LRFN4Q6PJG9 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC17.94■□□□□ 0.46
LRFN4Q6PJG9 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LRFN4Q6PJG9 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRFN4Q6PJG9 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC17.94■□□□□ 0.46
LRFN4Q6PJG9 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRFN4Q6PJG9 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC17.94■□□□□ 0.46
LRFN4Q6PJG9 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRFN4Q6PJG9 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRFN4Q6PJG9 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC17.93■□□□□ 0.46
LRFN4Q6PJG9 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC17.93■□□□□ 0.46
LRFN4Q6PJG9 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRFN4Q6PJG9 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRFN4Q6PJG9 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC17.93■□□□□ 0.46
LRFN4Q6PJG9 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LRFN4Q6PJG9 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRFN4Q6PJG9 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRFN4Q6PJG9 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
LRFN4Q6PJG9 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRFN4Q6PJG9 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
LRFN4Q6PJG9 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRFN4Q6PJG9 STK25-205ENST00000405883 1904 ntTSL 2 BASIC17.93■□□□□ 0.46
LRFN4Q6PJG9 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC17.93■□□□□ 0.46
LRFN4Q6PJG9 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC17.93■□□□□ 0.46
LRFN4Q6PJG9 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRFN4Q6PJG9 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
LRFN4Q6PJG9 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRFN4Q6PJG9 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRFN4Q6PJG9 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
LRFN4Q6PJG9 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
LRFN4Q6PJG9 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
LRFN4Q6PJG9 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.92■□□□□ 0.46
LRFN4Q6PJG9 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRFN4Q6PJG9 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRFN4Q6PJG9 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRFN4Q6PJG9 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRFN4Q6PJG9 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRFN4Q6PJG9 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRFN4Q6PJG9 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC17.92■□□□□ 0.46
LRFN4Q6PJG9 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC17.92■□□□□ 0.46
LRFN4Q6PJG9 ADM-207ENST00000530439 1839 ntTSL 2 BASIC17.92■□□□□ 0.46
LRFN4Q6PJG9 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.92■□□□□ 0.46
LRFN4Q6PJG9 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
LRFN4Q6PJG9 USP39-204ENST00000409766 2033 ntTSL 2 BASIC17.92■□□□□ 0.46
LRFN4Q6PJG9 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRFN4Q6PJG9 AFG3L1P-217ENST00000557444 2447 ntBASIC17.92■□□□□ 0.46
LRFN4Q6PJG9 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
LRFN4Q6PJG9 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LRFN4Q6PJG9 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC17.92■□□□□ 0.46
LRFN4Q6PJG9 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LRFN4Q6PJG9 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
LRFN4Q6PJG9 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms