Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CASC4Q6P4E1 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CASC4Q6P4E1 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.35■□□□□ 0.85
CASC4Q6P4E1 AL691432.2-201ENST00000607222 2038 ntBASIC20.35■□□□□ 0.85
CASC4Q6P4E1 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CASC4Q6P4E1 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CASC4Q6P4E1 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC20.35■□□□□ 0.85
CASC4Q6P4E1 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CASC4Q6P4E1 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CASC4Q6P4E1 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CASC4Q6P4E1 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CASC4Q6P4E1 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CASC4Q6P4E1 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.34■□□□□ 0.85
CASC4Q6P4E1 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CASC4Q6P4E1 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
CASC4Q6P4E1 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
CASC4Q6P4E1 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
CASC4Q6P4E1 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.34■□□□□ 0.85
CASC4Q6P4E1 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.34■□□□□ 0.85
CASC4Q6P4E1 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.34■□□□□ 0.85
CASC4Q6P4E1 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
CASC4Q6P4E1 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.34■□□□□ 0.85
CASC4Q6P4E1 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CASC4Q6P4E1 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CASC4Q6P4E1 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CASC4Q6P4E1 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CASC4Q6P4E1 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.34■□□□□ 0.85
CASC4Q6P4E1 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CASC4Q6P4E1 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CASC4Q6P4E1 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CASC4Q6P4E1 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CASC4Q6P4E1 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CASC4Q6P4E1 HCG11-201ENST00000411553 5696 ntBASIC20.33■□□□□ 0.85
CASC4Q6P4E1 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
CASC4Q6P4E1 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CASC4Q6P4E1 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.33■□□□□ 0.85
CASC4Q6P4E1 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.33■□□□□ 0.85
CASC4Q6P4E1 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CASC4Q6P4E1 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CASC4Q6P4E1 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
CASC4Q6P4E1 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC20.33■□□□□ 0.85
CASC4Q6P4E1 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC20.33■□□□□ 0.85
CASC4Q6P4E1 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.33■□□□□ 0.85
CASC4Q6P4E1 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
CASC4Q6P4E1 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.33■□□□□ 0.85
CASC4Q6P4E1 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
CASC4Q6P4E1 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.33■□□□□ 0.84
CASC4Q6P4E1 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CASC4Q6P4E1 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.84
CASC4Q6P4E1 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CASC4Q6P4E1 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CASC4Q6P4E1 BX119927.1-201ENST00000636596 1552 ntBASIC20.33■□□□□ 0.84
CASC4Q6P4E1 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CASC4Q6P4E1 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CASC4Q6P4E1 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
CASC4Q6P4E1 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CASC4Q6P4E1 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CASC4Q6P4E1 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
CASC4Q6P4E1 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
CASC4Q6P4E1 AC007952.6-201ENST00000573168 2673 ntBASIC20.32■□□□□ 0.84
CASC4Q6P4E1 AC003957.1-201ENST00000625108 2673 ntBASIC20.32■□□□□ 0.84
CASC4Q6P4E1 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.32■□□□□ 0.84
CASC4Q6P4E1 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
CASC4Q6P4E1 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CASC4Q6P4E1 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
CASC4Q6P4E1 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CASC4Q6P4E1 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CASC4Q6P4E1 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CASC4Q6P4E1 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.32■□□□□ 0.84
CASC4Q6P4E1 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CASC4Q6P4E1 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
CASC4Q6P4E1 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CASC4Q6P4E1 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CASC4Q6P4E1 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
CASC4Q6P4E1 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
CASC4Q6P4E1 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.31■□□□□ 0.84
CASC4Q6P4E1 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC20.31■□□□□ 0.84
CASC4Q6P4E1 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CASC4Q6P4E1 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.31■□□□□ 0.84
CASC4Q6P4E1 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CASC4Q6P4E1 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CASC4Q6P4E1 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
CASC4Q6P4E1 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CASC4Q6P4E1 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CASC4Q6P4E1 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CASC4Q6P4E1 RARRES2P6-201ENST00000567333 442 ntBASIC20.31■□□□□ 0.84
CASC4Q6P4E1 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.31■□□□□ 0.84
CASC4Q6P4E1 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.31■□□□□ 0.84
CASC4Q6P4E1 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CASC4Q6P4E1 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CASC4Q6P4E1 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CASC4Q6P4E1 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CASC4Q6P4E1 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CASC4Q6P4E1 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
CASC4Q6P4E1 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CASC4Q6P4E1 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CASC4Q6P4E1 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.3■□□□□ 0.84
CASC4Q6P4E1 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CASC4Q6P4E1 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CASC4Q6P4E1 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms