Protein–RNA interactions for Protein: Q5VWM5

PRAMEF9, PRAME family member 9/15, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF9Q5VWM5 AL138781.1-201ENST00000566567 1274 ntBASIC19.25■□□□□ 0.67
PRAMEF9Q5VWM5 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC19.25■□□□□ 0.67
PRAMEF9Q5VWM5 AC092118.2-201ENST00000613495 667 ntBASIC19.25■□□□□ 0.67
PRAMEF9Q5VWM5 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PRAMEF9Q5VWM5 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PRAMEF9Q5VWM5 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.25■□□□□ 0.67
PRAMEF9Q5VWM5 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PRAMEF9Q5VWM5 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PRAMEF9Q5VWM5 KRT8P20-201ENST00000423953 1409 ntBASIC19.25■□□□□ 0.67
PRAMEF9Q5VWM5 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
PRAMEF9Q5VWM5 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
PRAMEF9Q5VWM5 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.24■□□□□ 0.67
PRAMEF9Q5VWM5 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PRAMEF9Q5VWM5 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PRAMEF9Q5VWM5 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PRAMEF9Q5VWM5 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
PRAMEF9Q5VWM5 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PRAMEF9Q5VWM5 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
PRAMEF9Q5VWM5 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
PRAMEF9Q5VWM5 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC19.24■□□□□ 0.67
PRAMEF9Q5VWM5 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PRAMEF9Q5VWM5 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC19.24■□□□□ 0.67
PRAMEF9Q5VWM5 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.24■□□□□ 0.67
PRAMEF9Q5VWM5 AC091874.3-201ENST00000512672 1195 ntBASIC19.24■□□□□ 0.67
PRAMEF9Q5VWM5 AC023632.3-201ENST00000521633 145 ntBASIC19.24■□□□□ 0.67
PRAMEF9Q5VWM5 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.24■□□□□ 0.67
PRAMEF9Q5VWM5 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
PRAMEF9Q5VWM5 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PRAMEF9Q5VWM5 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
PRAMEF9Q5VWM5 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
PRAMEF9Q5VWM5 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PRAMEF9Q5VWM5 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
PRAMEF9Q5VWM5 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PRAMEF9Q5VWM5 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PRAMEF9Q5VWM5 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PRAMEF9Q5VWM5 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PRAMEF9Q5VWM5 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PRAMEF9Q5VWM5 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PRAMEF9Q5VWM5 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PRAMEF9Q5VWM5 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
PRAMEF9Q5VWM5 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PRAMEF9Q5VWM5 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PRAMEF9Q5VWM5 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
PRAMEF9Q5VWM5 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PRAMEF9Q5VWM5 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.23■□□□□ 0.67
PRAMEF9Q5VWM5 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PRAMEF9Q5VWM5 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
PRAMEF9Q5VWM5 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PRAMEF9Q5VWM5 PPP1R14BP2-201ENST00000426284 444 ntBASIC19.23■□□□□ 0.67
PRAMEF9Q5VWM5 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.23■□□□□ 0.67
PRAMEF9Q5VWM5 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC19.23■□□□□ 0.67
PRAMEF9Q5VWM5 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PRAMEF9Q5VWM5 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.23■□□□□ 0.67
PRAMEF9Q5VWM5 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PRAMEF9Q5VWM5 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PRAMEF9Q5VWM5 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.23■□□□□ 0.67
PRAMEF9Q5VWM5 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PRAMEF9Q5VWM5 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PRAMEF9Q5VWM5 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PRAMEF9Q5VWM5 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
PRAMEF9Q5VWM5 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.23■□□□□ 0.67
PRAMEF9Q5VWM5 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PRAMEF9Q5VWM5 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PRAMEF9Q5VWM5 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19.23■□□□□ 0.67
PRAMEF9Q5VWM5 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PRAMEF9Q5VWM5 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
PRAMEF9Q5VWM5 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PRAMEF9Q5VWM5 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PRAMEF9Q5VWM5 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
PRAMEF9Q5VWM5 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PRAMEF9Q5VWM5 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PRAMEF9Q5VWM5 AL158211.5-201ENST00000623583 2518 ntBASIC19.22■□□□□ 0.67
PRAMEF9Q5VWM5 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
PRAMEF9Q5VWM5 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.22■□□□□ 0.67
PRAMEF9Q5VWM5 TMEM179-206ENST00000616017 1645 ntBASIC19.22■□□□□ 0.67
PRAMEF9Q5VWM5 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
PRAMEF9Q5VWM5 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PRAMEF9Q5VWM5 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.22■□□□□ 0.67
PRAMEF9Q5VWM5 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PRAMEF9Q5VWM5 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
PRAMEF9Q5VWM5 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
PRAMEF9Q5VWM5 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.22■□□□□ 0.67
PRAMEF9Q5VWM5 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PRAMEF9Q5VWM5 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
PRAMEF9Q5VWM5 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
PRAMEF9Q5VWM5 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
PRAMEF9Q5VWM5 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19.22■□□□□ 0.67
PRAMEF9Q5VWM5 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC19.22■□□□□ 0.67
PRAMEF9Q5VWM5 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC19.22■□□□□ 0.67
PRAMEF9Q5VWM5 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
PRAMEF9Q5VWM5 MYC-209ENST00000641252 345 ntBASIC19.22■□□□□ 0.67
PRAMEF9Q5VWM5 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.22■□□□□ 0.67
PRAMEF9Q5VWM5 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.22■□□□□ 0.67
PRAMEF9Q5VWM5 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PRAMEF9Q5VWM5 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PRAMEF9Q5VWM5 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PRAMEF9Q5VWM5 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.22■□□□□ 0.67
PRAMEF9Q5VWM5 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PRAMEF9Q5VWM5 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.22■□□□□ 0.67
PRAMEF9Q5VWM5 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms