Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC21.81■■□□□ 1.08
PRPF38BQ5VTL8 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC21.81■■□□□ 1.08
PRPF38BQ5VTL8 AC027796.2-201ENST00000575326 344 ntBASIC21.81■■□□□ 1.08
PRPF38BQ5VTL8 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PRPF38BQ5VTL8 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PRPF38BQ5VTL8 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC21.81■■□□□ 1.08
PRPF38BQ5VTL8 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC21.81■■□□□ 1.08
PRPF38BQ5VTL8 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PRPF38BQ5VTL8 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PRPF38BQ5VTL8 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PRPF38BQ5VTL8 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC21.8■■□□□ 1.08
PRPF38BQ5VTL8 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PRPF38BQ5VTL8 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC21.8■■□□□ 1.08
PRPF38BQ5VTL8 LINC01311-201ENST00000565162 1445 ntBASIC21.8■■□□□ 1.08
PRPF38BQ5VTL8 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
PRPF38BQ5VTL8 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC21.8■■□□□ 1.08
PRPF38BQ5VTL8 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
PRPF38BQ5VTL8 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC21.8■■□□□ 1.08
PRPF38BQ5VTL8 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PRPF38BQ5VTL8 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.8■■□□□ 1.08
PRPF38BQ5VTL8 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PRPF38BQ5VTL8 AC003102.1-202ENST00000563394 1796 ntBASIC21.8■■□□□ 1.08
PRPF38BQ5VTL8 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PRPF38BQ5VTL8 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PRPF38BQ5VTL8 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PRPF38BQ5VTL8 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
PRPF38BQ5VTL8 TSPY19P-201ENST00000418461 509 ntBASIC21.8■■□□□ 1.08
PRPF38BQ5VTL8 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PRPF38BQ5VTL8 TSPY18P-201ENST00000441642 509 ntBASIC21.8■■□□□ 1.08
PRPF38BQ5VTL8 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
PRPF38BQ5VTL8 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
PRPF38BQ5VTL8 HYMAI.1-201ENST00000620949 238 ntBASIC21.8■■□□□ 1.08
PRPF38BQ5VTL8 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PRPF38BQ5VTL8 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC21.8■■□□□ 1.08
PRPF38BQ5VTL8 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
PRPF38BQ5VTL8 C11orf96-202ENST00000528572 1834 ntBASIC21.8■■□□□ 1.08
PRPF38BQ5VTL8 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PRPF38BQ5VTL8 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PRPF38BQ5VTL8 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
PRPF38BQ5VTL8 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
PRPF38BQ5VTL8 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PRPF38BQ5VTL8 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC21.79■■□□□ 1.08
PRPF38BQ5VTL8 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
PRPF38BQ5VTL8 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC21.79■■□□□ 1.08
PRPF38BQ5VTL8 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC21.79■■□□□ 1.08
PRPF38BQ5VTL8 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC21.79■■□□□ 1.08
PRPF38BQ5VTL8 AC023632.3-201ENST00000521633 145 ntBASIC21.79■■□□□ 1.08
PRPF38BQ5VTL8 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC21.79■■□□□ 1.08
PRPF38BQ5VTL8 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC21.79■■□□□ 1.08
PRPF38BQ5VTL8 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC21.79■■□□□ 1.08
PRPF38BQ5VTL8 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC21.79■■□□□ 1.08
PRPF38BQ5VTL8 LINC01711-201ENST00000598340 967 ntBASIC21.79■■□□□ 1.08
PRPF38BQ5VTL8 CALM3-211ENST00000598871 561 ntTSL 4 BASIC21.79■■□□□ 1.08
PRPF38BQ5VTL8 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PRPF38BQ5VTL8 HLA-A-201ENST00000376802 1334 ntBASIC21.79■■□□□ 1.08
PRPF38BQ5VTL8 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
PRPF38BQ5VTL8 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC21.78■■□□□ 1.08
PRPF38BQ5VTL8 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
PRPF38BQ5VTL8 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PRPF38BQ5VTL8 MRPL3P1-201ENST00000400109 1033 ntBASIC21.78■■□□□ 1.08
PRPF38BQ5VTL8 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC21.78■■□□□ 1.08
PRPF38BQ5VTL8 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC21.78■■□□□ 1.08
PRPF38BQ5VTL8 MIR3197-201ENST00000582241 73 ntBASIC21.78■■□□□ 1.08
PRPF38BQ5VTL8 AL732292.2-201ENST00000609649 430 ntBASIC21.78■■□□□ 1.08
PRPF38BQ5VTL8 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
PRPF38BQ5VTL8 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC21.78■■□□□ 1.08
PRPF38BQ5VTL8 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC21.78■■□□□ 1.08
PRPF38BQ5VTL8 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PRPF38BQ5VTL8 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
PRPF38BQ5VTL8 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PRPF38BQ5VTL8 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC21.77■■□□□ 1.08
PRPF38BQ5VTL8 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC21.77■■□□□ 1.08
PRPF38BQ5VTL8 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC21.77■■□□□ 1.08
PRPF38BQ5VTL8 MIR3180-1-201ENST00000580374 94 ntBASIC21.77■■□□□ 1.08
PRPF38BQ5VTL8 MIR3180-3-201ENST00000584616 94 ntBASIC21.77■■□□□ 1.08
PRPF38BQ5VTL8 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
PRPF38BQ5VTL8 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC21.77■■□□□ 1.08
PRPF38BQ5VTL8 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC21.77■■□□□ 1.08
PRPF38BQ5VTL8 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PRPF38BQ5VTL8 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.77■■□□□ 1.08
PRPF38BQ5VTL8 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
PRPF38BQ5VTL8 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PRPF38BQ5VTL8 AC142381.3-201ENST00000568208 1670 ntBASIC21.76■■□□□ 1.07
PRPF38BQ5VTL8 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PRPF38BQ5VTL8 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
PRPF38BQ5VTL8 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC21.76■■□□□ 1.07
PRPF38BQ5VTL8 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
PRPF38BQ5VTL8 BX842568.4-201ENST00000421222 227 ntBASIC21.76■■□□□ 1.07
PRPF38BQ5VTL8 MFAP1P1-201ENST00000442257 1255 ntBASIC21.76■■□□□ 1.07
PRPF38BQ5VTL8 TSSC2-201ENST00000450217 709 ntBASIC21.76■■□□□ 1.07
PRPF38BQ5VTL8 KRT18P58-201ENST00000527480 1120 ntBASIC21.76■■□□□ 1.07
PRPF38BQ5VTL8 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC21.76■■□□□ 1.07
PRPF38BQ5VTL8 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
PRPF38BQ5VTL8 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PRPF38BQ5VTL8 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PRPF38BQ5VTL8 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PRPF38BQ5VTL8 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
PRPF38BQ5VTL8 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PRPF38BQ5VTL8 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC21.75■■□□□ 1.07
PRPF38BQ5VTL8 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms