Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC18.05■□□□□ 0.48
RNFT1Q5M7Z0 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC18.05■□□□□ 0.48
RNFT1Q5M7Z0 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC18.05■□□□□ 0.48
RNFT1Q5M7Z0 GRAP-204ENST00000573099 846 ntTSL 3 BASIC18.05■□□□□ 0.48
RNFT1Q5M7Z0 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC18.05■□□□□ 0.48
RNFT1Q5M7Z0 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC18.05■□□□□ 0.48
RNFT1Q5M7Z0 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
RNFT1Q5M7Z0 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNFT1Q5M7Z0 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.05■□□□□ 0.48
RNFT1Q5M7Z0 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNFT1Q5M7Z0 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RNFT1Q5M7Z0 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNFT1Q5M7Z0 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.04■□□□□ 0.48
RNFT1Q5M7Z0 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNFT1Q5M7Z0 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
RNFT1Q5M7Z0 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.04■□□□□ 0.48
RNFT1Q5M7Z0 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.04■□□□□ 0.48
RNFT1Q5M7Z0 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.04■□□□□ 0.48
RNFT1Q5M7Z0 DPP3P2-201ENST00000416030 1696 ntBASIC18.04■□□□□ 0.48
RNFT1Q5M7Z0 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNFT1Q5M7Z0 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
RNFT1Q5M7Z0 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNFT1Q5M7Z0 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RNFT1Q5M7Z0 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNFT1Q5M7Z0 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC18.04■□□□□ 0.48
RNFT1Q5M7Z0 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC18.04■□□□□ 0.48
RNFT1Q5M7Z0 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.04■□□□□ 0.48
RNFT1Q5M7Z0 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC18.04■□□□□ 0.48
RNFT1Q5M7Z0 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.04■□□□□ 0.48
RNFT1Q5M7Z0 RPS15-203ENST00000586096 570 ntTSL 2 BASIC18.04■□□□□ 0.48
RNFT1Q5M7Z0 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNFT1Q5M7Z0 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
RNFT1Q5M7Z0 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
RNFT1Q5M7Z0 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RNFT1Q5M7Z0 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
RNFT1Q5M7Z0 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNFT1Q5M7Z0 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
RNFT1Q5M7Z0 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.03■□□□□ 0.48
RNFT1Q5M7Z0 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNFT1Q5M7Z0 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNFT1Q5M7Z0 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNFT1Q5M7Z0 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNFT1Q5M7Z0 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNFT1Q5M7Z0 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RNFT1Q5M7Z0 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNFT1Q5M7Z0 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
RNFT1Q5M7Z0 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
RNFT1Q5M7Z0 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RNFT1Q5M7Z0 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RNFT1Q5M7Z0 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNFT1Q5M7Z0 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.03■□□□□ 0.48
RNFT1Q5M7Z0 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC18.03■□□□□ 0.48
RNFT1Q5M7Z0 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RNFT1Q5M7Z0 FDX2-207ENST00000494368 584 ntTSL 4 BASIC18.03■□□□□ 0.48
RNFT1Q5M7Z0 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC18.03■□□□□ 0.48
RNFT1Q5M7Z0 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC18.03■□□□□ 0.48
RNFT1Q5M7Z0 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.03■□□□□ 0.48
RNFT1Q5M7Z0 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
RNFT1Q5M7Z0 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNFT1Q5M7Z0 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNFT1Q5M7Z0 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.03■□□□□ 0.48
RNFT1Q5M7Z0 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.03■□□□□ 0.48
RNFT1Q5M7Z0 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RNFT1Q5M7Z0 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNFT1Q5M7Z0 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNFT1Q5M7Z0 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.02■□□□□ 0.48
RNFT1Q5M7Z0 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RNFT1Q5M7Z0 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
RNFT1Q5M7Z0 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.48
RNFT1Q5M7Z0 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RNFT1Q5M7Z0 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RNFT1Q5M7Z0 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RNFT1Q5M7Z0 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RNFT1Q5M7Z0 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RNFT1Q5M7Z0 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RNFT1Q5M7Z0 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.02■□□□□ 0.48
RNFT1Q5M7Z0 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC18.02■□□□□ 0.48
RNFT1Q5M7Z0 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC18.02■□□□□ 0.48
RNFT1Q5M7Z0 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
RNFT1Q5M7Z0 CD177P1-201ENST00000606252 935 ntBASIC18.02■□□□□ 0.48
RNFT1Q5M7Z0 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC18.02■□□□□ 0.48
RNFT1Q5M7Z0 AC026471.5-201ENST00000615068 467 ntBASIC18.02■□□□□ 0.48
RNFT1Q5M7Z0 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC18.02■□□□□ 0.48
RNFT1Q5M7Z0 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.02■□□□□ 0.47
RNFT1Q5M7Z0 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.47
RNFT1Q5M7Z0 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RNFT1Q5M7Z0 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RNFT1Q5M7Z0 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.02■□□□□ 0.47
RNFT1Q5M7Z0 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.02■□□□□ 0.47
RNFT1Q5M7Z0 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNFT1Q5M7Z0 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNFT1Q5M7Z0 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNFT1Q5M7Z0 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC18.01■□□□□ 0.47
RNFT1Q5M7Z0 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC18.01■□□□□ 0.47
RNFT1Q5M7Z0 FAM197Y1-201ENST00000421178 764 ntBASIC18.01■□□□□ 0.47
RNFT1Q5M7Z0 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNFT1Q5M7Z0 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC18.01■□□□□ 0.47
RNFT1Q5M7Z0 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNFT1Q5M7Z0 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC18.01■□□□□ 0.47
RNFT1Q5M7Z0 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms