Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
KHDC1Q4VXA5 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
KHDC1Q4VXA5 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
KHDC1Q4VXA5 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.2■□□□□ 0.82
KHDC1Q4VXA5 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
KHDC1Q4VXA5 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
KHDC1Q4VXA5 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
KHDC1Q4VXA5 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.2■□□□□ 0.82
KHDC1Q4VXA5 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
KHDC1Q4VXA5 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.2■□□□□ 0.82
KHDC1Q4VXA5 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
KHDC1Q4VXA5 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.2■□□□□ 0.82
KHDC1Q4VXA5 DENND3-207ENST00000518347 850 ntTSL 2 BASIC20.2■□□□□ 0.82
KHDC1Q4VXA5 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
KHDC1Q4VXA5 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
KHDC1Q4VXA5 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.2■□□□□ 0.82
KHDC1Q4VXA5 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.2■□□□□ 0.82
KHDC1Q4VXA5 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
KHDC1Q4VXA5 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
KHDC1Q4VXA5 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
KHDC1Q4VXA5 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.2■□□□□ 0.82
KHDC1Q4VXA5 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
KHDC1Q4VXA5 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
KHDC1Q4VXA5 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
KHDC1Q4VXA5 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.19■□□□□ 0.82
KHDC1Q4VXA5 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
KHDC1Q4VXA5 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
KHDC1Q4VXA5 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.19■□□□□ 0.82
KHDC1Q4VXA5 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
KHDC1Q4VXA5 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
KHDC1Q4VXA5 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
KHDC1Q4VXA5 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.19■□□□□ 0.82
KHDC1Q4VXA5 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.19■□□□□ 0.82
KHDC1Q4VXA5 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
KHDC1Q4VXA5 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.19■□□□□ 0.82
KHDC1Q4VXA5 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.19■□□□□ 0.82
KHDC1Q4VXA5 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
KHDC1Q4VXA5 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
KHDC1Q4VXA5 AC092118.2-201ENST00000613495 667 ntBASIC20.19■□□□□ 0.82
KHDC1Q4VXA5 MIR2861-201ENST00000636310 90 ntBASIC20.19■□□□□ 0.82
KHDC1Q4VXA5 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.19■□□□□ 0.82
KHDC1Q4VXA5 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
KHDC1Q4VXA5 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
KHDC1Q4VXA5 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
KHDC1Q4VXA5 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.19■□□□□ 0.82
KHDC1Q4VXA5 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.19■□□□□ 0.82
KHDC1Q4VXA5 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
KHDC1Q4VXA5 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
KHDC1Q4VXA5 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
KHDC1Q4VXA5 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
KHDC1Q4VXA5 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
KHDC1Q4VXA5 FP700111.2-201ENST00000619190 1892 ntBASIC20.18■□□□□ 0.82
KHDC1Q4VXA5 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
KHDC1Q4VXA5 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
KHDC1Q4VXA5 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
KHDC1Q4VXA5 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
KHDC1Q4VXA5 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.18■□□□□ 0.82
KHDC1Q4VXA5 AC069152.1-201ENST00000438030 544 ntBASIC20.18■□□□□ 0.82
KHDC1Q4VXA5 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.18■□□□□ 0.82
KHDC1Q4VXA5 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.18■□□□□ 0.82
KHDC1Q4VXA5 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
KHDC1Q4VXA5 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
KHDC1Q4VXA5 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
KHDC1Q4VXA5 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.18■□□□□ 0.82
KHDC1Q4VXA5 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
KHDC1Q4VXA5 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
KHDC1Q4VXA5 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
KHDC1Q4VXA5 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.17■□□□□ 0.82
KHDC1Q4VXA5 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.17■□□□□ 0.82
KHDC1Q4VXA5 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
KHDC1Q4VXA5 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
KHDC1Q4VXA5 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.17■□□□□ 0.82
KHDC1Q4VXA5 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
KHDC1Q4VXA5 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
KHDC1Q4VXA5 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
KHDC1Q4VXA5 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
KHDC1Q4VXA5 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.17■□□□□ 0.82
KHDC1Q4VXA5 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
KHDC1Q4VXA5 BX323043.1-201ENST00000641006 1765 ntBASIC20.17■□□□□ 0.82
KHDC1Q4VXA5 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
KHDC1Q4VXA5 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.17■□□□□ 0.82
KHDC1Q4VXA5 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
KHDC1Q4VXA5 LSM12P1-201ENST00000411836 588 ntBASIC20.17■□□□□ 0.82
KHDC1Q4VXA5 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.17■□□□□ 0.82
KHDC1Q4VXA5 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.17■□□□□ 0.82
KHDC1Q4VXA5 MIR4758-201ENST00000577688 71 ntBASIC20.17■□□□□ 0.82
KHDC1Q4VXA5 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
KHDC1Q4VXA5 AL356652.1-201ENST00000615962 565 ntBASIC20.17■□□□□ 0.82
KHDC1Q4VXA5 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
KHDC1Q4VXA5 AC105020.6-201ENST00000621523 1217 ntBASIC20.17■□□□□ 0.82
KHDC1Q4VXA5 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.17■□□□□ 0.82
KHDC1Q4VXA5 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
KHDC1Q4VXA5 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.17■□□□□ 0.82
KHDC1Q4VXA5 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.17■□□□□ 0.82
KHDC1Q4VXA5 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
KHDC1Q4VXA5 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
KHDC1Q4VXA5 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
KHDC1Q4VXA5 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
KHDC1Q4VXA5 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
KHDC1Q4VXA5 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms