Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 FP700111.2-201ENST00000619190 1892 ntBASIC17.43■□□□□ 0.38
CHRFAM7AQ494W8 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CHRFAM7AQ494W8 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHRFAM7AQ494W8 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHRFAM7AQ494W8 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CHRFAM7AQ494W8 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHRFAM7AQ494W8 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHRFAM7AQ494W8 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHRFAM7AQ494W8 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.42■□□□□ 0.38
CHRFAM7AQ494W8 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHRFAM7AQ494W8 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CHRFAM7AQ494W8 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHRFAM7AQ494W8 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC17.42■□□□□ 0.38
CHRFAM7AQ494W8 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHRFAM7AQ494W8 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHRFAM7AQ494W8 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CHRFAM7AQ494W8 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
CHRFAM7AQ494W8 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
CHRFAM7AQ494W8 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHRFAM7AQ494W8 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHRFAM7AQ494W8 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC17.42■□□□□ 0.38
CHRFAM7AQ494W8 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHRFAM7AQ494W8 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CHRFAM7AQ494W8 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC17.42■□□□□ 0.38
CHRFAM7AQ494W8 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.42■□□□□ 0.38
CHRFAM7AQ494W8 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHRFAM7AQ494W8 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CHRFAM7AQ494W8 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC17.42■□□□□ 0.38
CHRFAM7AQ494W8 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHRFAM7AQ494W8 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CHRFAM7AQ494W8 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CHRFAM7AQ494W8 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHRFAM7AQ494W8 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHRFAM7AQ494W8 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CHRFAM7AQ494W8 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17.42■□□□□ 0.38
CHRFAM7AQ494W8 BID-203ENST00000399765 1879 ntTSL 2 BASIC17.41■□□□□ 0.38
CHRFAM7AQ494W8 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CHRFAM7AQ494W8 AC055733.4-201ENST00000638462 1354 ntBASIC17.41■□□□□ 0.38
CHRFAM7AQ494W8 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHRFAM7AQ494W8 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHRFAM7AQ494W8 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CHRFAM7AQ494W8 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC17.41■□□□□ 0.38
CHRFAM7AQ494W8 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHRFAM7AQ494W8 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHRFAM7AQ494W8 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CHRFAM7AQ494W8 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CHRFAM7AQ494W8 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC17.41■□□□□ 0.38
CHRFAM7AQ494W8 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC17.41■□□□□ 0.38
CHRFAM7AQ494W8 UNC93B4-201ENST00000505679 747 ntBASIC17.41■□□□□ 0.38
CHRFAM7AQ494W8 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CHRFAM7AQ494W8 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CHRFAM7AQ494W8 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC17.41■□□□□ 0.38
CHRFAM7AQ494W8 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC17.41■□□□□ 0.38
CHRFAM7AQ494W8 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC17.41■□□□□ 0.38
CHRFAM7AQ494W8 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHRFAM7AQ494W8 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
CHRFAM7AQ494W8 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHRFAM7AQ494W8 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC17.41■□□□□ 0.38
CHRFAM7AQ494W8 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CHRFAM7AQ494W8 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC17.41■□□□□ 0.38
CHRFAM7AQ494W8 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CHRFAM7AQ494W8 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHRFAM7AQ494W8 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHRFAM7AQ494W8 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC17.41■□□□□ 0.38
CHRFAM7AQ494W8 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC17.41■□□□□ 0.38
CHRFAM7AQ494W8 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHRFAM7AQ494W8 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHRFAM7AQ494W8 DET1-207ENST00000564406 2315 ntTSL 2 BASIC17.41■□□□□ 0.38
CHRFAM7AQ494W8 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHRFAM7AQ494W8 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CHRFAM7AQ494W8 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHRFAM7AQ494W8 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
CHRFAM7AQ494W8 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC17.4■□□□□ 0.38
CHRFAM7AQ494W8 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
CHRFAM7AQ494W8 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHRFAM7AQ494W8 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC17.4■□□□□ 0.38
CHRFAM7AQ494W8 GAS7-202ENST00000396115 929 ntTSL 5 BASIC17.4■□□□□ 0.38
CHRFAM7AQ494W8 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
CHRFAM7AQ494W8 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC17.4■□□□□ 0.38
CHRFAM7AQ494W8 AC128676.1-201ENST00000454392 318 ntBASIC17.4■□□□□ 0.38
CHRFAM7AQ494W8 AC016405.3-201ENST00000607710 860 ntBASIC17.4■□□□□ 0.38
CHRFAM7AQ494W8 AC083880.1-201ENST00000608266 535 ntBASIC17.4■□□□□ 0.38
CHRFAM7AQ494W8 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CHRFAM7AQ494W8 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC17.4■□□□□ 0.38
CHRFAM7AQ494W8 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
CHRFAM7AQ494W8 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.38
CHRFAM7AQ494W8 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CHRFAM7AQ494W8 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CHRFAM7AQ494W8 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
CHRFAM7AQ494W8 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
CHRFAM7AQ494W8 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
CHRFAM7AQ494W8 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHRFAM7AQ494W8 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHRFAM7AQ494W8 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC17.39■□□□□ 0.37
CHRFAM7AQ494W8 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CHRFAM7AQ494W8 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC17.39■□□□□ 0.37
CHRFAM7AQ494W8 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHRFAM7AQ494W8 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CHRFAM7AQ494W8 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHRFAM7AQ494W8 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms