Protein–RNA interactions for Protein: Q12468

RRI1, COP9 signalosome complex subunit 5, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RRI1Q12468 RPL26BYGR034W 384 nt1.19□□□□□ -2.22
RRI1Q12468 snR190snR190 190 nt1.18□□□□□ -2.22
RRI1Q12468 STB6YKL072W 2301 nt1.18□□□□□ -2.22
RRI1Q12468 CDC25YLR310C 4770 nt1.17□□□□□ -2.22
RRI1Q12468 NST1YNL091W 3723 nt1.17□□□□□ -2.22
RRI1Q12468 tH(GUG)E1tH(GUG)E1 72 nt1.17□□□□□ -2.22
RRI1Q12468 tH(GUG)E2tH(GUG)E2 72 nt1.17□□□□□ -2.22
RRI1Q12468 tH(GUG)G1tH(GUG)G1 72 nt1.17□□□□□ -2.22
RRI1Q12468 tH(GUG)G2tH(GUG)G2 72 nt1.17□□□□□ -2.22
RRI1Q12468 tH(GUG)HtH(GUG)H 72 nt1.17□□□□□ -2.22
RRI1Q12468 tH(GUG)KtH(GUG)K 72 nt1.17□□□□□ -2.22
RRI1Q12468 tH(GUG)MtH(GUG)M 72 nt1.17□□□□□ -2.22
RRI1Q12468 Q0143Q0143 153 nt1.17□□□□□ -2.22
RRI1Q12468 YLR041WYLR041W 321 nt1.17□□□□□ -2.22
RRI1Q12468 YBL039C-AYBL039C-A 84 nt1.17□□□□□ -2.22
RRI1Q12468 ROM2YLR371W 4071 nt1.16□□□□□ -2.22
RRI1Q12468 FYV10YIL097W 1551 nt1.16□□□□□ -2.22
RRI1Q12468 RAD9YDR217C 3930 nt1.16□□□□□ -2.22
RRI1Q12468 TAH1YCR060W 336 nt1.15□□□□□ -2.23
RRI1Q12468 CHS6YJL099W 2241 nt1.14□□□□□ -2.23
RRI1Q12468 ANS1YHR126C 480 nt1.13□□□□□ -2.23
RRI1Q12468 KAP120YPL125W 3099 nt1.12□□□□□ -2.23
RRI1Q12468 YCL001W-BYCL001W-B 255 nt1.11□□□□□ -2.23
RRI1Q12468 YOR329W-AYOR329W-A 210 nt1.1□□□□□ -2.23
RRI1Q12468 SEC8YPR055W 3198 nt1.08□□□□□ -2.24
RRI1Q12468 YLR232WYLR232W 348 nt1.08□□□□□ -2.24
RRI1Q12468 PRP16YKR086W 3216 nt1.07□□□□□ -2.24
RRI1Q12468 SPT7YBR081C 3999 nt1.07□□□□□ -2.24
RRI1Q12468 IML1YJR138W 4755 nt1.07□□□□□ -2.24
RRI1Q12468 tV(UAC)BtV(UAC)B 74 nt1.07□□□□□ -2.24
RRI1Q12468 tV(UAC)DtV(UAC)D 74 nt1.07□□□□□ -2.24
RRI1Q12468 QCR9YGR183C 201 nt1.06□□□□□ -2.24
RRI1Q12468 YNL205CYNL205C 423 nt1.06□□□□□ -2.24
RRI1Q12468 YGR130CYGR130C 2451 nt1.06□□□□□ -2.24
RRI1Q12468 YPR160W-AYPR160W-A 81 nt1.05□□□□□ -2.24
RRI1Q12468 snR39BsnR39B 96 nt1.05□□□□□ -2.24
RRI1Q12468 YJR029WYJR029W 5268 nt1.05□□□□□ -2.24
RRI1Q12468 YPR137C-BYPR137C-B 5268 nt1.05□□□□□ -2.24
RRI1Q12468 snR85snR85 171 nt1.04□□□□□ -2.24
RRI1Q12468 YDR544CYDR544C 429 nt1.04□□□□□ -2.24
RRI1Q12468 YHR131W-AYHR131W-A 246 nt1.04□□□□□ -2.24
RRI1Q12468 YLR399W-AYLR399W-A 105 nt1.04□□□□□ -2.24
RRI1Q12468 YNL067W-BYNL067W-B 141 nt1.04□□□□□ -2.24
RRI1Q12468 tN(GUU)QtN(GUU)Q 71 nt1.03□□□□□ -2.24
RRI1Q12468 OST4YDL232W 111 nt1.02□□□□□ -2.25
RRI1Q12468 YIL071W-AYIL071W-A 477 nt1.02□□□□□ -2.25
RRI1Q12468 SIP4YJL089W 2490 nt1.01□□□□□ -2.25
RRI1Q12468 VAM6YDL077C 3150 nt1.01□□□□□ -2.25
RRI1Q12468 tM(CAU)Q2tM(CAU)Q2 78 nt1□□□□□ -2.25
RRI1Q12468 YCR095W-AYCR095W-A 159 nt0.98□□□□□ -2.25
RRI1Q12468 SOM1YEL059C-A 225 nt0.97□□□□□ -2.25
RRI1Q12468 EMT1tM(CAU)D 73 nt0.97□□□□□ -2.25
RRI1Q12468 EMT5tM(CAU)J1 73 nt0.97□□□□□ -2.25
RRI1Q12468 EMT3tM(CAU)J2 73 nt0.97□□□□□ -2.25
RRI1Q12468 EMT4tM(CAU)M 73 nt0.97□□□□□ -2.25
RRI1Q12468 EMT2tM(CAU)O2 73 nt0.97□□□□□ -2.25
RRI1Q12468 YBR099CYBR099C 384 nt0.97□□□□□ -2.25
RRI1Q12468 COG6YNL041C 2520 nt0.97□□□□□ -2.25
RRI1Q12468 YDR210WYDR210W 228 nt0.95□□□□□ -2.26
RRI1Q12468 BEM3YPL115C 3387 nt0.95□□□□□ -2.26
RRI1Q12468 SEC1YDR164C 2175 nt0.94□□□□□ -2.26
RRI1Q12468 YSP1YHR155W 3687 nt0.94□□□□□ -2.26
RRI1Q12468 RPM2YML091C 3609 nt0.93□□□□□ -2.26
RRI1Q12468 YDL073WYDL073W 2955 nt0.93□□□□□ -2.26
RRI1Q12468 YJL127W-AYJL127W-A 117 nt0.92□□□□□ -2.26
RRI1Q12468 UBP3YER151C 2739 nt0.91□□□□□ -2.26
RRI1Q12468 RKR1YMR247C 4689 nt0.91□□□□□ -2.26
RRI1Q12468 BUD3YCL014W 4911 nt0.88□□□□□ -2.27
RRI1Q12468 YGR146C-AYGR146C-A 162 nt0.88□□□□□ -2.27
RRI1Q12468 YBR072C-AYBR072C-A 162 nt0.88□□□□□ -2.27
RRI1Q12468 BEM2YER155C 6504 nt0.87□□□□□ -2.27
RRI1Q12468 PMP2YEL017C-A 132 nt0.87□□□□□ -2.27
RRI1Q12468 ULP2YIL031W 3105 nt0.86□□□□□ -2.27
RRI1Q12468 SCC2YDR180W 4482 nt0.86□□□□□ -2.27
RRI1Q12468 STF2YGR008C 255 nt0.85□□□□□ -2.27
RRI1Q12468 GLG1YKR058W 1851 nt0.85□□□□□ -2.27
RRI1Q12468 YPR117WYPR117W 7470 nt0.84□□□□□ -2.27
RRI1Q12468 YNL103W-AYNL103W-A 90 nt0.84□□□□□ -2.27
RRI1Q12468 DOP1YDR141C 5097 nt0.82□□□□□ -2.28
RRI1Q12468 BIR1YJR089W 2865 nt0.82□□□□□ -2.28
RRI1Q12468 NNF2YGR089W 2811 nt0.82□□□□□ -2.28
RRI1Q12468 RCO1YMR075W 2055 nt0.81□□□□□ -2.28
RRI1Q12468 YLL006W-AYLL006W-A 177 nt0.81□□□□□ -2.28
RRI1Q12468 TFB5YDR079C-A 219 nt0.78□□□□□ -2.28
RRI1Q12468 snR61snR61 90 nt0.77□□□□□ -2.29
RRI1Q12468 YNL266WYNL266W 420 nt0.77□□□□□ -2.29
RRI1Q12468 PAU24YBR301W 363 nt0.77□□□□□ -2.29
RRI1Q12468 YOR192C-BYOR192C-B 5313 nt0.76□□□□□ -2.29
RRI1Q12468 BUL2YML111W 2763 nt0.75□□□□□ -2.29
RRI1Q12468 YBL109WYBL109W 336 nt0.74□□□□□ -2.29
RRI1Q12468 YBR178WYBR178W 375 nt0.74□□□□□ -2.29
RRI1Q12468 NIP1YMR309C 2439 nt0.73□□□□□ -2.29
RRI1Q12468 YPL060C-AYPL060C-A 3315 nt0.72□□□□□ -2.29
RRI1Q12468 CSE1YGL238W 2883 nt0.71□□□□□ -2.3
RRI1Q12468 YDR524C-AYDR524C-A 120 nt0.71□□□□□ -2.3
RRI1Q12468 MYO1YHR023W 5787 nt0.7□□□□□ -2.3
RRI1Q12468 HUG1YML058W-A 207 nt0.7□□□□□ -2.3
RRI1Q12468 YMR326CYMR326C 309 nt0.69□□□□□ -2.3
RRI1Q12468 SEC10YLR166C 2616 nt0.69□□□□□ -2.3
RRI1Q12468 PET111YMR257C 2403 nt0.68□□□□□ -2.3
Retrieved 100 of 7,029 protein–RNA pairs in 35.6 ms