Protein–RNA interactions for Protein: Q04839

GFD1, mRNA transport factor GFD1, yeastyeast

Known RBP Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
GFD1Q04839 YBL039C-AYBL039C-A 84 nt1.32□□□□□ -2.2
GFD1Q04839 AZF1YOR113W 2745 nt1.31□□□□□ -2.2
GFD1Q04839 YLL020CYLL020C 306 nt1.31□□□□□ -2.2
GFD1Q04839 YBR200W-AYBR200W-A 165 nt1.3□□□□□ -2.2
GFD1Q04839 NUP145YGL092W 3954 nt1.29□□□□□ -2.2
GFD1Q04839 YOR314W-AYOR314W-A 111 nt1.29□□□□□ -2.2
GFD1Q04839 snR190snR190 190 nt1.29□□□□□ -2.2
GFD1Q04839 SMC1YFL008W 3678 nt1.29□□□□□ -2.2
GFD1Q04839 YCL001W-BYCL001W-B 255 nt1.27□□□□□ -2.21
GFD1Q04839 KAP120YPL125W 3099 nt1.27□□□□□ -2.21
GFD1Q04839 RAD9YDR217C 3930 nt1.27□□□□□ -2.21
GFD1Q04839 YML002WYML002W 2214 nt1.26□□□□□ -2.21
GFD1Q04839 YGR130CYGR130C 2451 nt1.26□□□□□ -2.21
GFD1Q04839 FYV10YIL097W 1551 nt1.25□□□□□ -2.21
GFD1Q04839 TAH1YCR060W 336 nt1.25□□□□□ -2.21
GFD1Q04839 YKL100W-AYKL100W-A 90 nt1.25□□□□□ -2.21
GFD1Q04839 IML1YJR138W 4755 nt1.25□□□□□ -2.21
GFD1Q04839 MSN5YDR335W 3675 nt1.25□□□□□ -2.21
GFD1Q04839 UTP8YGR128C 2142 nt1.24□□□□□ -2.21
GFD1Q04839 RPL26BYGR034W 384 nt1.24□□□□□ -2.21
GFD1Q04839 YIL071W-AYIL071W-A 477 nt1.24□□□□□ -2.21
GFD1Q04839 YOR329W-AYOR329W-A 210 nt1.24□□□□□ -2.21
GFD1Q04839 snR39BsnR39B 96 nt1.24□□□□□ -2.21
GFD1Q04839 CHS6YJL099W 2241 nt1.23□□□□□ -2.21
GFD1Q04839 YNL205CYNL205C 423 nt1.23□□□□□ -2.21
GFD1Q04839 SIP4YJL089W 2490 nt1.22□□□□□ -2.21
GFD1Q04839 YNL284C-BYNL284C-B 5268 nt1.22□□□□□ -2.21
GFD1Q04839 SPT7YBR081C 3999 nt1.2□□□□□ -2.22
GFD1Q04839 snR85snR85 171 nt1.2□□□□□ -2.22
GFD1Q04839 tV(UAC)BtV(UAC)B 74 nt1.2□□□□□ -2.22
GFD1Q04839 tV(UAC)DtV(UAC)D 74 nt1.2□□□□□ -2.22
GFD1Q04839 PRP16YKR086W 3216 nt1.2□□□□□ -2.22
GFD1Q04839 BUD3YCL014W 4911 nt1.18□□□□□ -2.22
GFD1Q04839 tN(GUU)QtN(GUU)Q 71 nt1.18□□□□□ -2.22
GFD1Q04839 YDR544CYDR544C 429 nt1.17□□□□□ -2.22
GFD1Q04839 COG6YNL041C 2520 nt1.17□□□□□ -2.22
GFD1Q04839 MYO1YHR023W 5787 nt1.15□□□□□ -2.22
GFD1Q04839 NST1YNL091W 3723 nt1.15□□□□□ -2.22
GFD1Q04839 OST4YDL232W 111 nt1.15□□□□□ -2.23
GFD1Q04839 QCR9YGR183C 201 nt1.15□□□□□ -2.23
GFD1Q04839 YHR131W-AYHR131W-A 246 nt1.15□□□□□ -2.23
GFD1Q04839 YPR160W-AYPR160W-A 81 nt1.15□□□□□ -2.23
GFD1Q04839 YLR232WYLR232W 348 nt1.14□□□□□ -2.23
GFD1Q04839 SEC8YPR055W 3198 nt1.13□□□□□ -2.23
GFD1Q04839 YNL067W-BYNL067W-B 141 nt1.13□□□□□ -2.23
GFD1Q04839 ROM2YLR371W 4071 nt1.13□□□□□ -2.23
GFD1Q04839 YDL073WYDL073W 2955 nt1.12□□□□□ -2.23
GFD1Q04839 BEM2YER155C 6504 nt1.11□□□□□ -2.23
GFD1Q04839 UBP3YER151C 2739 nt1.11□□□□□ -2.23
GFD1Q04839 VAM6YDL077C 3150 nt1.11□□□□□ -2.23
GFD1Q04839 STF2YGR008C 255 nt1.11□□□□□ -2.23
GFD1Q04839 HUG1YML058W-A 207 nt1.11□□□□□ -2.23
GFD1Q04839 SEC1YDR164C 2175 nt1.1□□□□□ -2.23
GFD1Q04839 YDR210WYDR210W 228 nt1.1□□□□□ -2.23
GFD1Q04839 YPR117WYPR117W 7470 nt1.1□□□□□ -2.23
GFD1Q04839 YLR399W-AYLR399W-A 105 nt1.09□□□□□ -2.23
GFD1Q04839 RKR1YMR247C 4689 nt1.09□□□□□ -2.24
GFD1Q04839 YCR095W-AYCR095W-A 159 nt1.08□□□□□ -2.24
GFD1Q04839 YJR029WYJR029W 5268 nt1.07□□□□□ -2.24
GFD1Q04839 YPR137C-BYPR137C-B 5268 nt1.07□□□□□ -2.24
GFD1Q04839 tM(CAU)Q2tM(CAU)Q2 78 nt1.06□□□□□ -2.24
GFD1Q04839 YBR099CYBR099C 384 nt1.06□□□□□ -2.24
GFD1Q04839 SOM1YEL059C-A 225 nt1.05□□□□□ -2.24
GFD1Q04839 CLU1YMR012W 3834 nt1.04□□□□□ -2.24
GFD1Q04839 RCO1YMR075W 2055 nt1.02□□□□□ -2.25
GFD1Q04839 EMT1tM(CAU)D 73 nt1□□□□□ -2.25
GFD1Q04839 EMT5tM(CAU)J1 73 nt1□□□□□ -2.25
GFD1Q04839 EMT3tM(CAU)J2 73 nt1□□□□□ -2.25
GFD1Q04839 EMT4tM(CAU)M 73 nt1□□□□□ -2.25
GFD1Q04839 EMT2tM(CAU)O2 73 nt1□□□□□ -2.25
GFD1Q04839 YNL103W-AYNL103W-A 90 nt0.99□□□□□ -2.25
GFD1Q04839 PAU24YBR301W 363 nt0.99□□□□□ -2.25
GFD1Q04839 PMP2YEL017C-A 132 nt0.98□□□□□ -2.25
GFD1Q04839 YSP1YHR155W 3687 nt0.98□□□□□ -2.25
GFD1Q04839 YJL127W-AYJL127W-A 117 nt0.97□□□□□ -2.25
GFD1Q04839 SCC2YDR180W 4482 nt0.97□□□□□ -2.25
GFD1Q04839 NNF2YGR089W 2811 nt0.96□□□□□ -2.26
GFD1Q04839 YGR146C-AYGR146C-A 162 nt0.96□□□□□ -2.26
GFD1Q04839 RPM2YML091C 3609 nt0.95□□□□□ -2.26
GFD1Q04839 YPL060C-AYPL060C-A 3315 nt0.95□□□□□ -2.26
GFD1Q04839 YBR072C-AYBR072C-A 162 nt0.95□□□□□ -2.26
GFD1Q04839 YBL109WYBL109W 336 nt0.94□□□□□ -2.26
GFD1Q04839 BEM3YPL115C 3387 nt0.94□□□□□ -2.26
GFD1Q04839 BIR1YJR089W 2865 nt0.92□□□□□ -2.26
GFD1Q04839 DOP1YDR141C 5097 nt0.92□□□□□ -2.26
GFD1Q04839 ULP2YIL031W 3105 nt0.91□□□□□ -2.26
GFD1Q04839 GLG1YKR058W 1851 nt0.9□□□□□ -2.27
GFD1Q04839 BUL2YML111W 2763 nt0.89□□□□□ -2.27
GFD1Q04839 TFB5YDR079C-A 219 nt0.89□□□□□ -2.27
GFD1Q04839 YOR192C-BYOR192C-B 5313 nt0.88□□□□□ -2.27
GFD1Q04839 snR61snR61 90 nt0.86□□□□□ -2.27
GFD1Q04839 YNL266WYNL266W 420 nt0.86□□□□□ -2.27
GFD1Q04839 YLL006W-AYLL006W-A 177 nt0.85□□□□□ -2.27
GFD1Q04839 YBR178WYBR178W 375 nt0.84□□□□□ -2.27
GFD1Q04839 YDR524C-AYDR524C-A 120 nt0.83□□□□□ -2.28
GFD1Q04839 LTE1YAL024C 4308 nt0.83□□□□□ -2.28
GFD1Q04839 YNL054W-BYNL054W-B 5250 nt0.82□□□□□ -2.28
GFD1Q04839 NIP1YMR309C 2439 nt0.8□□□□□ -2.28
GFD1Q04839 YGL041C-BYGL041C-B 183 nt0.79□□□□□ -2.28
GFD1Q04839 YIL142C-AYIL142C-A 333 nt0.78□□□□□ -2.28
Retrieved 100 of 7,029 protein–RNA pairs in 103.3 ms