Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.69■□□□□ 0.74
CDK3Q00526 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC19.69■□□□□ 0.74
CDK3Q00526 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
CDK3Q00526 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.69■□□□□ 0.74
CDK3Q00526 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC19.69■□□□□ 0.74
CDK3Q00526 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.69■□□□□ 0.74
CDK3Q00526 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.69■□□□□ 0.74
CDK3Q00526 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.69■□□□□ 0.74
CDK3Q00526 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDK3Q00526 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
CDK3Q00526 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CDK3Q00526 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
CDK3Q00526 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
CDK3Q00526 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CDK3Q00526 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
CDK3Q00526 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CDK3Q00526 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDK3Q00526 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.69■□□□□ 0.74
CDK3Q00526 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDK3Q00526 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CDK3Q00526 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDK3Q00526 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.68■□□□□ 0.74
CDK3Q00526 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.68■□□□□ 0.74
CDK3Q00526 AP005212.1-201ENST00000581547 1997 ntBASIC19.68■□□□□ 0.74
CDK3Q00526 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDK3Q00526 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC19.68■□□□□ 0.74
CDK3Q00526 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC19.68■□□□□ 0.74
CDK3Q00526 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDK3Q00526 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CDK3Q00526 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDK3Q00526 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
CDK3Q00526 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.68■□□□□ 0.74
CDK3Q00526 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC19.68■□□□□ 0.74
CDK3Q00526 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.68■□□□□ 0.74
CDK3Q00526 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.68■□□□□ 0.74
CDK3Q00526 AC110285.5-201ENST00000611501 352 ntBASIC19.68■□□□□ 0.74
CDK3Q00526 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.68■□□□□ 0.74
CDK3Q00526 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.68■□□□□ 0.74
CDK3Q00526 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CDK3Q00526 MME-217ENST00000616757 1315 ntTSL 5 BASIC19.68■□□□□ 0.74
CDK3Q00526 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.68■□□□□ 0.74
CDK3Q00526 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CDK3Q00526 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDK3Q00526 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CDK3Q00526 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDK3Q00526 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.67■□□□□ 0.74
CDK3Q00526 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.67■□□□□ 0.74
CDK3Q00526 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDK3Q00526 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
CDK3Q00526 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.67■□□□□ 0.74
CDK3Q00526 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.67■□□□□ 0.74
CDK3Q00526 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC19.67■□□□□ 0.74
CDK3Q00526 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CDK3Q00526 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDK3Q00526 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.67■□□□□ 0.74
CDK3Q00526 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDK3Q00526 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDK3Q00526 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CDK3Q00526 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDK3Q00526 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.67■□□□□ 0.74
CDK3Q00526 FEM1AP1-201ENST00000431297 1995 ntBASIC19.66■□□□□ 0.74
CDK3Q00526 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CDK3Q00526 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDK3Q00526 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDK3Q00526 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
CDK3Q00526 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDK3Q00526 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDK3Q00526 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDK3Q00526 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
CDK3Q00526 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
CDK3Q00526 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC19.66■□□□□ 0.74
CDK3Q00526 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDK3Q00526 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CDK3Q00526 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC19.66■□□□□ 0.74
CDK3Q00526 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
CDK3Q00526 AC008550.1-201ENST00000511500 884 ntBASIC19.66■□□□□ 0.74
CDK3Q00526 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDK3Q00526 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDK3Q00526 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDK3Q00526 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.66■□□□□ 0.74
CDK3Q00526 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CDK3Q00526 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CDK3Q00526 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
CDK3Q00526 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDK3Q00526 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
CDK3Q00526 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDK3Q00526 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDK3Q00526 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDK3Q00526 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.65■□□□□ 0.74
CDK3Q00526 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDK3Q00526 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
CDK3Q00526 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.65■□□□□ 0.74
CDK3Q00526 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDK3Q00526 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.65■□□□□ 0.74
CDK3Q00526 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CDK3Q00526 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CDK3Q00526 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CDK3Q00526 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.65■□□□□ 0.74
CDK3Q00526 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CDK3Q00526 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms