Protein–RNA interactions for Protein: P61088

UBE2N, Ubiquitin-conjugating enzyme E2 N, humanhuman

Known RBP Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2NP61088 KRT8P20-201ENST00000423953 1409 ntBASIC17.55■□□□□ 0.4
UBE2NP61088 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
UBE2NP61088 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
UBE2NP61088 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
UBE2NP61088 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
UBE2NP61088 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC17.55■□□□□ 0.4
UBE2NP61088 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UBE2NP61088 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
UBE2NP61088 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
UBE2NP61088 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UBE2NP61088 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UBE2NP61088 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UBE2NP61088 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UBE2NP61088 ESRRAP1-201ENST00000400596 1257 ntBASIC17.55■□□□□ 0.4
UBE2NP61088 TSPY20P-201ENST00000450910 630 ntBASIC17.55■□□□□ 0.4
UBE2NP61088 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
UBE2NP61088 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC17.55■□□□□ 0.4
UBE2NP61088 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC17.55■□□□□ 0.4
UBE2NP61088 AL031963.3-201ENST00000606441 850 ntBASIC17.55■□□□□ 0.4
UBE2NP61088 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
UBE2NP61088 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC17.55■□□□□ 0.4
UBE2NP61088 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
UBE2NP61088 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
UBE2NP61088 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC17.55■□□□□ 0.4
UBE2NP61088 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UBE2NP61088 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UBE2NP61088 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
UBE2NP61088 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBE2NP61088 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBE2NP61088 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
UBE2NP61088 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
UBE2NP61088 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
UBE2NP61088 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBE2NP61088 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
UBE2NP61088 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBE2NP61088 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBE2NP61088 POU5F1P3-201ENST00000428824 1078 ntBASIC17.54■□□□□ 0.4
UBE2NP61088 ABHD17AP6-201ENST00000458502 1044 ntBASIC17.54■□□□□ 0.4
UBE2NP61088 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
UBE2NP61088 AC026366.1-201ENST00000488803 879 ntBASIC17.54■□□□□ 0.4
UBE2NP61088 UNC93B4-201ENST00000505679 747 ntBASIC17.54■□□□□ 0.4
UBE2NP61088 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC17.54■□□□□ 0.4
UBE2NP61088 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC17.54■□□□□ 0.4
UBE2NP61088 MIR4651-201ENST00000582622 73 ntBASIC17.54■□□□□ 0.4
UBE2NP61088 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
UBE2NP61088 AC006557.6-201ENST00000623071 864 ntBASIC17.54■□□□□ 0.4
UBE2NP61088 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBE2NP61088 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC17.54■□□□□ 0.4
UBE2NP61088 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
UBE2NP61088 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
UBE2NP61088 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
UBE2NP61088 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC17.54■□□□□ 0.4
UBE2NP61088 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBE2NP61088 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC17.54■□□□□ 0.4
UBE2NP61088 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBE2NP61088 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
UBE2NP61088 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
UBE2NP61088 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
UBE2NP61088 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
UBE2NP61088 HCG11-201ENST00000411553 5696 ntBASIC17.53■□□□□ 0.4
UBE2NP61088 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
UBE2NP61088 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
UBE2NP61088 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
UBE2NP61088 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
UBE2NP61088 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
UBE2NP61088 AC020907.5-201ENST00000624372 1936 ntBASIC17.53■□□□□ 0.4
UBE2NP61088 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
UBE2NP61088 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
UBE2NP61088 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
UBE2NP61088 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
UBE2NP61088 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
UBE2NP61088 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
UBE2NP61088 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
UBE2NP61088 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
UBE2NP61088 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
UBE2NP61088 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
UBE2NP61088 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
UBE2NP61088 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
UBE2NP61088 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC17.52■□□□□ 0.4
UBE2NP61088 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
UBE2NP61088 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
UBE2NP61088 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
UBE2NP61088 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
UBE2NP61088 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC17.52■□□□□ 0.4
UBE2NP61088 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
UBE2NP61088 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC17.52■□□□□ 0.4
UBE2NP61088 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
UBE2NP61088 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
UBE2NP61088 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
UBE2NP61088 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC17.52■□□□□ 0.4
UBE2NP61088 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
UBE2NP61088 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC17.52■□□□□ 0.4
UBE2NP61088 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC17.52■□□□□ 0.4
UBE2NP61088 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC17.52■□□□□ 0.4
UBE2NP61088 SLC29A4P2-201ENST00000504749 1089 ntBASIC17.52■□□□□ 0.4
UBE2NP61088 MMAB-206ENST00000540016 945 ntTSL 3 BASIC17.52■□□□□ 0.4
UBE2NP61088 IRX5-204ENST00000560154 879 ntTSL 5 BASIC17.52■□□□□ 0.4
UBE2NP61088 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
UBE2NP61088 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
UBE2NP61088 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 167.7 ms