Protein–RNA interactions for Protein: P60468

SEC61B, Protein transport protein Sec61 subunit beta, humanhuman

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61BP60468 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
SEC61BP60468 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
SEC61BP60468 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
SEC61BP60468 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC10.76□□□□□ -0.69
SEC61BP60468 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
SEC61BP60468 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
SEC61BP60468 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
SEC61BP60468 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
SEC61BP60468 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
SEC61BP60468 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
SEC61BP60468 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
SEC61BP60468 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC10.75□□□□□ -0.69
SEC61BP60468 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
SEC61BP60468 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC10.75□□□□□ -0.69
SEC61BP60468 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC10.75□□□□□ -0.69
SEC61BP60468 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
SEC61BP60468 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
SEC61BP60468 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
SEC61BP60468 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC10.75□□□□□ -0.69
SEC61BP60468 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC10.75□□□□□ -0.69
SEC61BP60468 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
SEC61BP60468 MIR1224-201ENST00000408193 85 ntBASIC10.75□□□□□ -0.69
SEC61BP60468 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
SEC61BP60468 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
SEC61BP60468 HES2-206ENST00000489730 730 ntTSL 2 BASIC10.75□□□□□ -0.69
SEC61BP60468 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC10.75□□□□□ -0.69
SEC61BP60468 PNN-205ENST00000556530 601 ntTSL 2 BASIC10.75□□□□□ -0.69
SEC61BP60468 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC10.75□□□□□ -0.69
SEC61BP60468 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC10.75□□□□□ -0.69
SEC61BP60468 AF186192.3-201ENST00000583427 947 ntBASIC10.75□□□□□ -0.69
SEC61BP60468 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC10.75□□□□□ -0.69
SEC61BP60468 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC10.75□□□□□ -0.69
SEC61BP60468 AC073195.1-201ENST00000607241 877 ntBASIC10.75□□□□□ -0.69
SEC61BP60468 SNX21-213ENST00000614929 587 ntTSL 5 BASIC10.75□□□□□ -0.69
SEC61BP60468 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
SEC61BP60468 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
SEC61BP60468 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
SEC61BP60468 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC10.75□□□□□ -0.69
SEC61BP60468 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
SEC61BP60468 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
SEC61BP60468 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC10.75□□□□□ -0.69
SEC61BP60468 PALM-207ENST00000590161 2137 ntTSL 4 BASIC10.75□□□□□ -0.69
SEC61BP60468 KRT8P20-201ENST00000423953 1409 ntBASIC10.75□□□□□ -0.69
SEC61BP60468 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC10.75□□□□□ -0.69
SEC61BP60468 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
SEC61BP60468 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
SEC61BP60468 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
SEC61BP60468 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC10.74□□□□□ -0.69
SEC61BP60468 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
SEC61BP60468 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC10.74□□□□□ -0.69
SEC61BP60468 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
SEC61BP60468 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC10.74□□□□□ -0.69
SEC61BP60468 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
SEC61BP60468 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
SEC61BP60468 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC10.74□□□□□ -0.69
SEC61BP60468 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
SEC61BP60468 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
SEC61BP60468 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC10.74□□□□□ -0.69
SEC61BP60468 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
SEC61BP60468 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
SEC61BP60468 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC10.74□□□□□ -0.69
SEC61BP60468 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC10.74□□□□□ -0.69
SEC61BP60468 SAPCD2P4-201ENST00000424595 1171 ntBASIC10.74□□□□□ -0.69
SEC61BP60468 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC10.74□□□□□ -0.69
SEC61BP60468 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
SEC61BP60468 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC10.74□□□□□ -0.69
SEC61BP60468 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC10.74□□□□□ -0.69
SEC61BP60468 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
SEC61BP60468 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC10.74□□□□□ -0.69
SEC61BP60468 CD177P1-201ENST00000606252 935 ntBASIC10.74□□□□□ -0.69
SEC61BP60468 AC121338.2-201ENST00000622535 1744 ntBASIC10.74□□□□□ -0.69
SEC61BP60468 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
SEC61BP60468 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
SEC61BP60468 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
SEC61BP60468 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
SEC61BP60468 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
SEC61BP60468 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC10.74□□□□□ -0.69
SEC61BP60468 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC10.74□□□□□ -0.69
SEC61BP60468 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC10.74□□□□□ -0.69
SEC61BP60468 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC10.74□□□□□ -0.69
SEC61BP60468 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
SEC61BP60468 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC10.73□□□□□ -0.69
SEC61BP60468 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC10.73□□□□□ -0.69
SEC61BP60468 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC10.73□□□□□ -0.69
SEC61BP60468 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SEC61BP60468 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SEC61BP60468 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SEC61BP60468 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SEC61BP60468 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
SEC61BP60468 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SEC61BP60468 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SEC61BP60468 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
SEC61BP60468 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC10.73□□□□□ -0.69
SEC61BP60468 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC10.73□□□□□ -0.69
SEC61BP60468 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SEC61BP60468 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC10.73□□□□□ -0.69
SEC61BP60468 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC10.73□□□□□ -0.69
SEC61BP60468 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC10.73□□□□□ -0.69
SEC61BP60468 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC10.73□□□□□ -0.69
SEC61BP60468 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC10.73□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms