Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CMC4P56277 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC14.89□□□□□ -0.03
CMC4P56277 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CMC4P56277 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CMC4P56277 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
CMC4P56277 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CMC4P56277 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CMC4P56277 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CMC4P56277 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC14.89□□□□□ -0.03
CMC4P56277 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC14.89□□□□□ -0.03
CMC4P56277 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC14.89□□□□□ -0.03
CMC4P56277 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC14.89□□□□□ -0.03
CMC4P56277 AC026366.1-201ENST00000488803 879 ntBASIC14.89□□□□□ -0.03
CMC4P56277 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC14.89□□□□□ -0.03
CMC4P56277 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CMC4P56277 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC14.89□□□□□ -0.03
CMC4P56277 AC008687.6-201ENST00000596318 630 ntBASIC14.89□□□□□ -0.03
CMC4P56277 AC120498.8-201ENST00000614275 531 ntBASIC14.89□□□□□ -0.03
CMC4P56277 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CMC4P56277 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CMC4P56277 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC14.89□□□□□ -0.03
CMC4P56277 CD37-204ENST00000535669 1674 ntTSL 2 BASIC14.89□□□□□ -0.03
CMC4P56277 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
CMC4P56277 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CMC4P56277 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CMC4P56277 CLDN5-201ENST00000403084 2357 ntBASIC14.89□□□□□ -0.03
CMC4P56277 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC14.89□□□□□ -0.03
CMC4P56277 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CMC4P56277 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CMC4P56277 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC14.89□□□□□ -0.03
CMC4P56277 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
CMC4P56277 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CMC4P56277 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CMC4P56277 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CMC4P56277 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC14.88□□□□□ -0.03
CMC4P56277 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CMC4P56277 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CMC4P56277 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC14.88□□□□□ -0.03
CMC4P56277 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CMC4P56277 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC14.88□□□□□ -0.03
CMC4P56277 AP003097.1-201ENST00000530657 1135 ntBASIC14.88□□□□□ -0.03
CMC4P56277 PRKY-204ENST00000533551 1019 ntBASIC14.88□□□□□ -0.03
CMC4P56277 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC14.88□□□□□ -0.03
CMC4P56277 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CMC4P56277 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CMC4P56277 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CMC4P56277 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC14.88□□□□□ -0.03
CMC4P56277 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
CMC4P56277 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CMC4P56277 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CMC4P56277 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CMC4P56277 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CMC4P56277 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CMC4P56277 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CMC4P56277 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CMC4P56277 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC14.87□□□□□ -0.03
CMC4P56277 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CMC4P56277 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
CMC4P56277 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CMC4P56277 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CMC4P56277 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CMC4P56277 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
CMC4P56277 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CMC4P56277 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC14.87□□□□□ -0.03
CMC4P56277 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC14.87□□□□□ -0.03
CMC4P56277 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
CMC4P56277 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CMC4P56277 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
CMC4P56277 SOX15-203ENST00000570788 1093 ntBASIC14.87□□□□□ -0.03
CMC4P56277 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CMC4P56277 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CMC4P56277 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC14.87□□□□□ -0.03
CMC4P56277 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CMC4P56277 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CMC4P56277 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CMC4P56277 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CMC4P56277 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
CMC4P56277 AL137060.1-201ENST00000618151 2648 ntBASIC14.87□□□□□ -0.03
CMC4P56277 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CMC4P56277 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
CMC4P56277 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CMC4P56277 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
CMC4P56277 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CMC4P56277 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CMC4P56277 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CMC4P56277 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CMC4P56277 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC14.86□□□□□ -0.03
CMC4P56277 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CMC4P56277 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CMC4P56277 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CMC4P56277 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC14.86□□□□□ -0.03
CMC4P56277 PTBP1P-201ENST00000554374 1601 ntBASIC14.86□□□□□ -0.03
CMC4P56277 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CMC4P56277 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CMC4P56277 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
CMC4P56277 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC14.86□□□□□ -0.03
CMC4P56277 POM121L13P-201ENST00000422362 380 ntBASIC14.86□□□□□ -0.03
CMC4P56277 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC14.86□□□□□ -0.03
CMC4P56277 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
CMC4P56277 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms