Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PKNOX1P55347 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.56■□□□□ 0.72
PKNOX1P55347 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.56■□□□□ 0.72
PKNOX1P55347 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PKNOX1P55347 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PKNOX1P55347 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PKNOX1P55347 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PKNOX1P55347 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.56■□□□□ 0.72
PKNOX1P55347 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PKNOX1P55347 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PKNOX1P55347 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
PKNOX1P55347 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.55■□□□□ 0.72
PKNOX1P55347 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
PKNOX1P55347 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PKNOX1P55347 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PKNOX1P55347 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.55■□□□□ 0.72
PKNOX1P55347 KRT18P11-201ENST00000435214 1283 ntBASIC19.55■□□□□ 0.72
PKNOX1P55347 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC19.55■□□□□ 0.72
PKNOX1P55347 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
PKNOX1P55347 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.55■□□□□ 0.72
PKNOX1P55347 AC007322.4-201ENST00000509611 723 ntBASIC19.55■□□□□ 0.72
PKNOX1P55347 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
PKNOX1P55347 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PKNOX1P55347 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.55■□□□□ 0.72
PKNOX1P55347 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC19.55■□□□□ 0.72
PKNOX1P55347 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.55■□□□□ 0.72
PKNOX1P55347 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PKNOX1P55347 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
PKNOX1P55347 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PKNOX1P55347 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PKNOX1P55347 BX323043.1-201ENST00000641006 1765 ntBASIC19.55■□□□□ 0.72
PKNOX1P55347 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PKNOX1P55347 CYP21A1P-202ENST00000354927 1481 ntBASIC19.54■□□□□ 0.72
PKNOX1P55347 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PKNOX1P55347 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
PKNOX1P55347 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
PKNOX1P55347 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
PKNOX1P55347 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.54■□□□□ 0.72
PKNOX1P55347 AP000974.1-201ENST00000623909 2387 ntBASIC19.54■□□□□ 0.72
PKNOX1P55347 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PKNOX1P55347 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.54■□□□□ 0.72
PKNOX1P55347 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.54■□□□□ 0.72
PKNOX1P55347 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.54■□□□□ 0.72
PKNOX1P55347 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.54■□□□□ 0.72
PKNOX1P55347 AC013268.1-206ENST00000638368 961 ntBASIC19.54■□□□□ 0.72
PKNOX1P55347 AC112229.1-201ENST00000639295 961 ntBASIC19.54■□□□□ 0.72
PKNOX1P55347 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.54■□□□□ 0.72
PKNOX1P55347 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
PKNOX1P55347 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
PKNOX1P55347 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
PKNOX1P55347 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PKNOX1P55347 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PKNOX1P55347 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
PKNOX1P55347 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
PKNOX1P55347 TMEM179-206ENST00000616017 1645 ntBASIC19.54■□□□□ 0.72
PKNOX1P55347 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PKNOX1P55347 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
PKNOX1P55347 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
PKNOX1P55347 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PKNOX1P55347 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PKNOX1P55347 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PKNOX1P55347 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
PKNOX1P55347 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
PKNOX1P55347 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.53■□□□□ 0.72
PKNOX1P55347 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
PKNOX1P55347 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.53■□□□□ 0.72
PKNOX1P55347 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PKNOX1P55347 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
PKNOX1P55347 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.53■□□□□ 0.72
PKNOX1P55347 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
PKNOX1P55347 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PKNOX1P55347 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
PKNOX1P55347 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
PKNOX1P55347 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
PKNOX1P55347 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.53■□□□□ 0.72
PKNOX1P55347 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.53■□□□□ 0.72
PKNOX1P55347 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.53■□□□□ 0.72
PKNOX1P55347 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PKNOX1P55347 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.53■□□□□ 0.72
PKNOX1P55347 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.53■□□□□ 0.72
PKNOX1P55347 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PKNOX1P55347 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PKNOX1P55347 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.52■□□□□ 0.72
PKNOX1P55347 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
PKNOX1P55347 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PKNOX1P55347 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PKNOX1P55347 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PKNOX1P55347 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PKNOX1P55347 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
PKNOX1P55347 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
PKNOX1P55347 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
PKNOX1P55347 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.52■□□□□ 0.72
PKNOX1P55347 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
PKNOX1P55347 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PKNOX1P55347 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PKNOX1P55347 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.52■□□□□ 0.72
PKNOX1P55347 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.52■□□□□ 0.72
PKNOX1P55347 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC19.52■□□□□ 0.72
PKNOX1P55347 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
PKNOX1P55347 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms