Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC20.45■□□□□ 0.86
CDH4P55283 MTDHP1-201ENST00000605323 784 ntBASIC20.45■□□□□ 0.86
CDH4P55283 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.45■□□□□ 0.86
CDH4P55283 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC20.45■□□□□ 0.86
CDH4P55283 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CDH4P55283 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
CDH4P55283 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDH4P55283 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
CDH4P55283 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CDH4P55283 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CDH4P55283 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.44■□□□□ 0.86
CDH4P55283 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.44■□□□□ 0.86
CDH4P55283 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDH4P55283 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
CDH4P55283 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
CDH4P55283 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDH4P55283 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDH4P55283 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDH4P55283 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC20.44■□□□□ 0.86
CDH4P55283 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CDH4P55283 AL121906.2-201ENST00000621597 723 ntBASIC20.44■□□□□ 0.86
CDH4P55283 AC092667.1-201ENST00000434301 2586 ntBASIC20.44■□□□□ 0.86
CDH4P55283 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDH4P55283 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.44■□□□□ 0.86
CDH4P55283 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.44■□□□□ 0.86
CDH4P55283 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC20.44■□□□□ 0.86
CDH4P55283 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
CDH4P55283 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CDH4P55283 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDH4P55283 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.43■□□□□ 0.86
CDH4P55283 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
CDH4P55283 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CDH4P55283 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC20.43■□□□□ 0.86
CDH4P55283 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CDH4P55283 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDH4P55283 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.43■□□□□ 0.86
CDH4P55283 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDH4P55283 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.43■□□□□ 0.86
CDH4P55283 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.43■□□□□ 0.86
CDH4P55283 AC098590.1-201ENST00000468126 897 ntBASIC20.43■□□□□ 0.86
CDH4P55283 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.43■□□□□ 0.86
CDH4P55283 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.43■□□□□ 0.86
CDH4P55283 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDH4P55283 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDH4P55283 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDH4P55283 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDH4P55283 LINC01006-201ENST00000333319 2292 ntBASIC20.43■□□□□ 0.86
CDH4P55283 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDH4P55283 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CDH4P55283 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.43■□□□□ 0.86
CDH4P55283 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
CDH4P55283 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDH4P55283 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDH4P55283 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.42■□□□□ 0.86
CDH4P55283 AL157384.1-201ENST00000445995 2473 ntBASIC20.42■□□□□ 0.86
CDH4P55283 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDH4P55283 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.42■□□□□ 0.86
CDH4P55283 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CDH4P55283 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20.42■□□□□ 0.86
CDH4P55283 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDH4P55283 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20.42■□□□□ 0.86
CDH4P55283 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
CDH4P55283 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20.42■□□□□ 0.86
CDH4P55283 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDH4P55283 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDH4P55283 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDH4P55283 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CDH4P55283 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDH4P55283 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDH4P55283 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.41■□□□□ 0.86
CDH4P55283 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CDH4P55283 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDH4P55283 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.41■□□□□ 0.86
CDH4P55283 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
CDH4P55283 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDH4P55283 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDH4P55283 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
CDH4P55283 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDH4P55283 GCSHP5-201ENST00000443090 522 ntBASIC20.41■□□□□ 0.86
CDH4P55283 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.41■□□□□ 0.86
CDH4P55283 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.41■□□□□ 0.86
CDH4P55283 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
CDH4P55283 C1QBPP2-201ENST00000528754 825 ntBASIC20.41■□□□□ 0.86
CDH4P55283 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC20.41■□□□□ 0.86
CDH4P55283 PRKY-204ENST00000533551 1019 ntBASIC20.41■□□□□ 0.86
CDH4P55283 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
CDH4P55283 AC142381.4-202ENST00000563973 229 ntBASIC20.41■□□□□ 0.86
CDH4P55283 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDH4P55283 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDH4P55283 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.41■□□□□ 0.86
CDH4P55283 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.41■□□□□ 0.86
CDH4P55283 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDH4P55283 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.41■□□□□ 0.86
CDH4P55283 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.41■□□□□ 0.86
CDH4P55283 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDH4P55283 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDH4P55283 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDH4P55283 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.4■□□□□ 0.86
CDH4P55283 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.4■□□□□ 0.86
CDH4P55283 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms