Protein–RNA interactions for Protein: P53285

VPS62, Vacuolar protein sorting-associated protein 62, yeastyeast

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS62P53285 ALY2YJL084C 3141 nt1.74□□□□□ -2.13
VPS62P53285 PAN2YGL094C 3348 nt1.74□□□□□ -2.13
VPS62P53285 YJL127W-AYJL127W-A 117 nt1.73□□□□□ -2.13
VPS62P53285 FYV10YIL097W 1551 nt1.72□□□□□ -2.13
VPS62P53285 RTP1YMR185W 2946 nt1.72□□□□□ -2.13
VPS62P53285 BRR2YER172C 6492 nt1.72□□□□□ -2.13
VPS62P53285 tT(UGU)HtT(UGU)H 72 nt1.71□□□□□ -2.14
VPS62P53285 YLR232WYLR232W 348 nt1.71□□□□□ -2.14
VPS62P53285 TMA7YLR262C-A 195 nt1.71□□□□□ -2.14
VPS62P53285 KAP120YPL125W 3099 nt1.7□□□□□ -2.14
VPS62P53285 COG6YNL041C 2520 nt1.69□□□□□ -2.14
VPS62P53285 YDR210WYDR210W 228 nt1.69□□□□□ -2.14
VPS62P53285 GEA2YEL022W 4380 nt1.69□□□□□ -2.14
VPS62P53285 MON2YNL297C 4911 nt1.69□□□□□ -2.14
VPS62P53285 NOP9YJL010C 2001 nt1.67□□□□□ -2.14
VPS62P53285 YNL266WYNL266W 420 nt1.67□□□□□ -2.14
VPS62P53285 STO1YMR125W 2586 nt1.67□□□□□ -2.14
VPS62P53285 BIR1YJR089W 2865 nt1.66□□□□□ -2.14
VPS62P53285 YAL037C-AYAL037C-A 93 nt1.66□□□□□ -2.14
VPS62P53285 snR190snR190 190 nt1.66□□□□□ -2.14
VPS62P53285 YLR041WYLR041W 321 nt1.65□□□□□ -2.15
VPS62P53285 YBR072C-AYBR072C-A 162 nt1.65□□□□□ -2.15
VPS62P53285 CLU1YMR012W 3834 nt1.65□□□□□ -2.15
VPS62P53285 TDA9YML081W 3756 nt1.64□□□□□ -2.15
VPS62P53285 LAA1YJL207C 6045 nt1.64□□□□□ -2.15
VPS62P53285 SKI3YPR189W 4299 nt1.63□□□□□ -2.15
VPS62P53285 SET3YKR029C 2256 nt1.63□□□□□ -2.15
VPS62P53285 WAR1YML076C 2835 nt1.63□□□□□ -2.15
VPS62P53285 KAP122YGL016W 3246 nt1.63□□□□□ -2.15
VPS62P53285 SEC1YDR164C 2175 nt1.62□□□□□ -2.15
VPS62P53285 YOL083C-AYOL083C-A 141 nt1.62□□□□□ -2.15
VPS62P53285 RPL26BYGR034W 384 nt1.61□□□□□ -2.15
VPS62P53285 YGR146C-AYGR146C-A 162 nt1.61□□□□□ -2.15
VPS62P53285 snR62snR62 100 nt1.6□□□□□ -2.15
VPS62P53285 IML1YJR138W 4755 nt1.6□□□□□ -2.15
VPS62P53285 PIK1YNL267W 3201 nt1.57□□□□□ -2.16
VPS62P53285 PKH3YDR466W 2697 nt1.57□□□□□ -2.16
VPS62P53285 VPS15YBR097W 4365 nt1.57□□□□□ -2.16
VPS62P53285 APL3YBL037W 3078 nt1.57□□□□□ -2.16
VPS62P53285 MEC1YBR136W 7107 nt1.57□□□□□ -2.16
VPS62P53285 RAD9YDR217C 3930 nt1.57□□□□□ -2.16
VPS62P53285 tH(GUG)E1tH(GUG)E1 72 nt1.56□□□□□ -2.16
VPS62P53285 tH(GUG)E2tH(GUG)E2 72 nt1.56□□□□□ -2.16
VPS62P53285 tH(GUG)G1tH(GUG)G1 72 nt1.56□□□□□ -2.16
VPS62P53285 tH(GUG)G2tH(GUG)G2 72 nt1.56□□□□□ -2.16
VPS62P53285 tH(GUG)HtH(GUG)H 72 nt1.56□□□□□ -2.16
VPS62P53285 tH(GUG)KtH(GUG)K 72 nt1.56□□□□□ -2.16
VPS62P53285 tH(GUG)MtH(GUG)M 72 nt1.56□□□□□ -2.16
VPS62P53285 NUP145YGL092W 3954 nt1.55□□□□□ -2.16
VPS62P53285 ASE1YOR058C 2658 nt1.55□□□□□ -2.16
VPS62P53285 KCS1YDR017C 3153 nt1.54□□□□□ -2.16
VPS62P53285 YBL071C-BYBL071C-B 99 nt1.53□□□□□ -2.16
VPS62P53285 BEM3YPL115C 3387 nt1.51□□□□□ -2.17
VPS62P53285 PRP16YKR086W 3216 nt1.51□□□□□ -2.17
VPS62P53285 YBR196C-AYBR196C-A 150 nt1.51□□□□□ -2.17
VPS62P53285 YBR200W-AYBR200W-A 165 nt1.51□□□□□ -2.17
VPS62P53285 YNL284C-BYNL284C-B 5268 nt1.51□□□□□ -2.17
VPS62P53285 tF(GAA)BtF(GAA)B 73 nt1.49□□□□□ -2.17
VPS62P53285 tF(GAA)FtF(GAA)F 73 nt1.49□□□□□ -2.17
VPS62P53285 tF(GAA)GtF(GAA)G 73 nt1.49□□□□□ -2.17
VPS62P53285 tF(GAA)H1tF(GAA)H1 73 nt1.49□□□□□ -2.17
VPS62P53285 tF(GAA)H2tF(GAA)H2 73 nt1.49□□□□□ -2.17
VPS62P53285 tF(GAA)MtF(GAA)M 73 nt1.49□□□□□ -2.17
VPS62P53285 tF(GAA)P1tF(GAA)P1 73 nt1.49□□□□□ -2.17
VPS62P53285 tF(GAA)P2tF(GAA)P2 73 nt1.49□□□□□ -2.17
VPS62P53285 SWI4YER111C 3282 nt1.49□□□□□ -2.17
VPS62P53285 YDL073WYDL073W 2955 nt1.49□□□□□ -2.17
VPS62P53285 NUP188YML103C 4968 nt1.49□□□□□ -2.17
VPS62P53285 YDR034C-AYDR034C-A 177 nt1.48□□□□□ -2.17
VPS62P53285 tV(UAC)BtV(UAC)B 74 nt1.48□□□□□ -2.17
VPS62P53285 tV(UAC)DtV(UAC)D 74 nt1.48□□□□□ -2.17
VPS62P53285 UBP3YER151C 2739 nt1.47□□□□□ -2.17
VPS62P53285 TRM732YMR259C 4263 nt1.47□□□□□ -2.17
VPS62P53285 tN(GUU)QtN(GUU)Q 71 nt1.45□□□□□ -2.18
VPS62P53285 YBL100W-CYBL100W-C 120 nt1.45□□□□□ -2.18
VPS62P53285 SEC8YPR055W 3198 nt1.45□□□□□ -2.18
VPS62P53285 SAC3YDR159W 3906 nt1.45□□□□□ -2.18
VPS62P53285 RPS26AYGL189C 360 nt1.44□□□□□ -2.18
VPS62P53285 BST1YFL025C 3090 nt1.44□□□□□ -2.18
VPS62P53285 YCS4YLR272C 3531 nt1.44□□□□□ -2.18
VPS62P53285 PET127YOR017W 2403 nt1.44□□□□□ -2.18
VPS62P53285 IRA1YBR140C 9279 nt1.43□□□□□ -2.18
VPS62P53285 YOL164W-AYOL164W-A 183 nt1.43□□□□□ -2.18
VPS62P53285 SEC3YER008C 4011 nt1.43□□□□□ -2.18
VPS62P53285 AZF1YOR113W 2745 nt1.43□□□□□ -2.18
VPS62P53285 SEC10YLR166C 2616 nt1.42□□□□□ -2.18
VPS62P53285 FYV8YGR196C 2454 nt1.42□□□□□ -2.18
VPS62P53285 CDC25YLR310C 4770 nt1.41□□□□□ -2.18
VPS62P53285 NNF2YGR089W 2811 nt1.4□□□□□ -2.18
VPS62P53285 YGR240C-AYGR240C-A 201 nt1.4□□□□□ -2.19
VPS62P53285 YLR399W-AYLR399W-A 105 nt1.39□□□□□ -2.19
VPS62P53285 YPR160W-AYPR160W-A 81 nt1.38□□□□□ -2.19
VPS62P53285 RPM2YML091C 3609 nt1.38□□□□□ -2.19
VPS62P53285 ROM2YLR371W 4071 nt1.37□□□□□ -2.19
VPS62P53285 SIP4YJL089W 2490 nt1.37□□□□□ -2.19
VPS62P53285 tQ(UUG)E2tQ(UUG)E2 72 nt1.37□□□□□ -2.19
VPS62P53285 YLR286W-AYLR286W-A 135 nt1.37□□□□□ -2.19
VPS62P53285 EST2YLR318W 2655 nt1.35□□□□□ -2.19
VPS62P53285 snR47snR47 99 nt1.35□□□□□ -2.19
VPS62P53285 CDC39YCR093W 6327 nt1.34□□□□□ -2.19
Retrieved 100 of 7,029 protein–RNA pairs in 7.6 ms