Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
HCFC1P51610 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC17.48■□□□□ 0.39
HCFC1P51610 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.48■□□□□ 0.39
HCFC1P51610 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HCFC1P51610 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.48■□□□□ 0.39
HCFC1P51610 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
HCFC1P51610 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HCFC1P51610 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
HCFC1P51610 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
HCFC1P51610 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC17.48■□□□□ 0.39
HCFC1P51610 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HCFC1P51610 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
HCFC1P51610 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HCFC1P51610 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HCFC1P51610 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.48■□□□□ 0.39
HCFC1P51610 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HCFC1P51610 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.48■□□□□ 0.39
HCFC1P51610 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HCFC1P51610 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC17.48■□□□□ 0.39
HCFC1P51610 KSR1P1-201ENST00000446298 240 ntBASIC17.48■□□□□ 0.39
HCFC1P51610 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
HCFC1P51610 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
HCFC1P51610 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HCFC1P51610 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC17.48■□□□□ 0.39
HCFC1P51610 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
HCFC1P51610 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HCFC1P51610 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
HCFC1P51610 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HCFC1P51610 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC17.48■□□□□ 0.39
HCFC1P51610 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
HCFC1P51610 LINC01568-207ENST00000641790 1380 ntBASIC17.47■□□□□ 0.39
HCFC1P51610 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HCFC1P51610 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
HCFC1P51610 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HCFC1P51610 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HCFC1P51610 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HCFC1P51610 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HCFC1P51610 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC17.47■□□□□ 0.39
HCFC1P51610 SLC25A3P1-201ENST00000443844 931 ntBASIC17.47■□□□□ 0.39
HCFC1P51610 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC17.47■□□□□ 0.39
HCFC1P51610 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17.47■□□□□ 0.39
HCFC1P51610 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC17.47■□□□□ 0.39
HCFC1P51610 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
HCFC1P51610 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HCFC1P51610 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC17.47■□□□□ 0.39
HCFC1P51610 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HCFC1P51610 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
HCFC1P51610 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
HCFC1P51610 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.47■□□□□ 0.39
HCFC1P51610 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HCFC1P51610 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HCFC1P51610 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HCFC1P51610 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC17.47■□□□□ 0.39
HCFC1P51610 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HCFC1P51610 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HCFC1P51610 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HCFC1P51610 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
HCFC1P51610 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC17.46■□□□□ 0.39
HCFC1P51610 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HCFC1P51610 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HCFC1P51610 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC17.46■□□□□ 0.39
HCFC1P51610 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HCFC1P51610 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HCFC1P51610 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.46■□□□□ 0.39
HCFC1P51610 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC17.46■□□□□ 0.39
HCFC1P51610 STAC-204ENST00000457375 1366 ntTSL 2 BASIC17.46■□□□□ 0.39
HCFC1P51610 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC17.46■□□□□ 0.39
HCFC1P51610 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
HCFC1P51610 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC17.46■□□□□ 0.38
HCFC1P51610 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HCFC1P51610 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
HCFC1P51610 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.45■□□□□ 0.38
HCFC1P51610 AP002982.1-201ENST00000492365 877 ntBASIC17.45■□□□□ 0.38
HCFC1P51610 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC17.45■□□□□ 0.38
HCFC1P51610 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.45■□□□□ 0.38
HCFC1P51610 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.45■□□□□ 0.38
HCFC1P51610 AP000525.1-201ENST00000608286 694 ntBASIC17.45■□□□□ 0.38
HCFC1P51610 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HCFC1P51610 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
HCFC1P51610 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC17.45■□□□□ 0.38
HCFC1P51610 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HCFC1P51610 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
HCFC1P51610 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HCFC1P51610 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC17.45■□□□□ 0.38
HCFC1P51610 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC17.45■□□□□ 0.38
HCFC1P51610 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HCFC1P51610 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
HCFC1P51610 AC010947.1-201ENST00000623454 693 ntBASIC17.45■□□□□ 0.38
HCFC1P51610 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC17.45■□□□□ 0.38
HCFC1P51610 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
HCFC1P51610 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HCFC1P51610 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
HCFC1P51610 AC027702.1-201ENST00000563810 1770 ntBASIC17.44■□□□□ 0.38
HCFC1P51610 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HCFC1P51610 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HCFC1P51610 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HCFC1P51610 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HCFC1P51610 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC17.44■□□□□ 0.38
HCFC1P51610 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
HCFC1P51610 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms