Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
CSNK1DP48730 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.08■□□□□ 0.81
CSNK1DP48730 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.08■□□□□ 0.81
CSNK1DP48730 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.08■□□□□ 0.81
CSNK1DP48730 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.08■□□□□ 0.81
CSNK1DP48730 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.08■□□□□ 0.81
CSNK1DP48730 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CSNK1DP48730 AC124283.5-201ENST00000624661 1809 ntBASIC20.08■□□□□ 0.8
CSNK1DP48730 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
CSNK1DP48730 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.8
CSNK1DP48730 AC116351.2-201ENST00000606540 1585 ntBASIC20.08■□□□□ 0.8
CSNK1DP48730 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
CSNK1DP48730 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.07■□□□□ 0.8
CSNK1DP48730 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
CSNK1DP48730 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CSNK1DP48730 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
CSNK1DP48730 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CSNK1DP48730 AL157384.1-201ENST00000445995 2473 ntBASIC20.07■□□□□ 0.8
CSNK1DP48730 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CSNK1DP48730 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CSNK1DP48730 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CSNK1DP48730 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC20.07■□□□□ 0.8
CSNK1DP48730 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.07■□□□□ 0.8
CSNK1DP48730 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CSNK1DP48730 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.07■□□□□ 0.8
CSNK1DP48730 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.07■□□□□ 0.8
CSNK1DP48730 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
CSNK1DP48730 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CSNK1DP48730 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
CSNK1DP48730 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CSNK1DP48730 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CSNK1DP48730 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CSNK1DP48730 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CSNK1DP48730 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CSNK1DP48730 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CSNK1DP48730 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CSNK1DP48730 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
CSNK1DP48730 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
CSNK1DP48730 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CSNK1DP48730 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CSNK1DP48730 PHGDH-210ENST00000641115 1638 ntBASIC20.06■□□□□ 0.8
CSNK1DP48730 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.06■□□□□ 0.8
CSNK1DP48730 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CSNK1DP48730 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CSNK1DP48730 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CSNK1DP48730 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC20.06■□□□□ 0.8
CSNK1DP48730 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CSNK1DP48730 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.06■□□□□ 0.8
CSNK1DP48730 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.06■□□□□ 0.8
CSNK1DP48730 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CSNK1DP48730 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CSNK1DP48730 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CSNK1DP48730 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CSNK1DP48730 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CSNK1DP48730 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CSNK1DP48730 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CSNK1DP48730 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CSNK1DP48730 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.05■□□□□ 0.8
CSNK1DP48730 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CSNK1DP48730 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CSNK1DP48730 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.05■□□□□ 0.8
CSNK1DP48730 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CSNK1DP48730 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CSNK1DP48730 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CSNK1DP48730 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.05■□□□□ 0.8
CSNK1DP48730 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CSNK1DP48730 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CSNK1DP48730 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CSNK1DP48730 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CSNK1DP48730 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CSNK1DP48730 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC20.05■□□□□ 0.8
CSNK1DP48730 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CSNK1DP48730 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CSNK1DP48730 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.05■□□□□ 0.8
CSNK1DP48730 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.05■□□□□ 0.8
CSNK1DP48730 AC133681.1-201ENST00000465482 601 ntBASIC20.05■□□□□ 0.8
CSNK1DP48730 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.05■□□□□ 0.8
CSNK1DP48730 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
CSNK1DP48730 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.05■□□□□ 0.8
CSNK1DP48730 PRKY-204ENST00000533551 1019 ntBASIC20.05■□□□□ 0.8
CSNK1DP48730 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC20.05■□□□□ 0.8
CSNK1DP48730 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC20.05■□□□□ 0.8
CSNK1DP48730 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CSNK1DP48730 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CSNK1DP48730 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CSNK1DP48730 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CSNK1DP48730 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
CSNK1DP48730 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CSNK1DP48730 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.04■□□□□ 0.8
CSNK1DP48730 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.04■□□□□ 0.8
CSNK1DP48730 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CSNK1DP48730 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
CSNK1DP48730 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
CSNK1DP48730 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC20.04■□□□□ 0.8
CSNK1DP48730 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CSNK1DP48730 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CSNK1DP48730 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CSNK1DP48730 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
CSNK1DP48730 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC20.04■□□□□ 0.8
CSNK1DP48730 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms