Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.36■□□□□ 0.53
SLC1A3P43003 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC1A3P43003 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC1A3P43003 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
SLC1A3P43003 AL355472.2-201ENST00000422958 438 ntBASIC18.36■□□□□ 0.53
SLC1A3P43003 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.36■□□□□ 0.53
SLC1A3P43003 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC18.36■□□□□ 0.53
SLC1A3P43003 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
SLC1A3P43003 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.36■□□□□ 0.53
SLC1A3P43003 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.36■□□□□ 0.53
SLC1A3P43003 AL589743.5-201ENST00000616611 1050 ntBASIC18.36■□□□□ 0.53
SLC1A3P43003 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC1A3P43003 AC087289.5-201ENST00000586076 3175 ntBASIC18.36■□□□□ 0.53
SLC1A3P43003 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC1A3P43003 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC1A3P43003 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.35■□□□□ 0.53
SLC1A3P43003 TCF3P1-201ENST00000423021 1937 ntBASIC18.35■□□□□ 0.53
SLC1A3P43003 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.35■□□□□ 0.53
SLC1A3P43003 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.35■□□□□ 0.53
SLC1A3P43003 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC1A3P43003 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
SLC1A3P43003 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
SLC1A3P43003 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
SLC1A3P43003 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC1A3P43003 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.35■□□□□ 0.53
SLC1A3P43003 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SLC1A3P43003 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
SLC1A3P43003 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC1A3P43003 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
SLC1A3P43003 MIR663A-201ENST00000385250 93 ntBASIC18.35■□□□□ 0.53
SLC1A3P43003 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.35■□□□□ 0.53
SLC1A3P43003 AF201337.1-201ENST00000520239 748 ntBASIC18.35■□□□□ 0.53
SLC1A3P43003 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SLC1A3P43003 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC1A3P43003 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.35■□□□□ 0.53
SLC1A3P43003 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
SLC1A3P43003 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
SLC1A3P43003 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.35■□□□□ 0.53
SLC1A3P43003 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC1A3P43003 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.35■□□□□ 0.53
SLC1A3P43003 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC1A3P43003 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC1A3P43003 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC1A3P43003 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SLC1A3P43003 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SLC1A3P43003 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC1A3P43003 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.34■□□□□ 0.53
SLC1A3P43003 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC1A3P43003 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC1A3P43003 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
SLC1A3P43003 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
SLC1A3P43003 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC1A3P43003 CROCCP5-201ENST00000436658 830 ntBASIC18.34■□□□□ 0.53
SLC1A3P43003 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SLC1A3P43003 AC105036.2-201ENST00000569468 176 ntBASIC18.34■□□□□ 0.53
SLC1A3P43003 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.34■□□□□ 0.53
SLC1A3P43003 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
SLC1A3P43003 AL050303.2-201ENST00000619798 666 ntBASIC18.34■□□□□ 0.53
SLC1A3P43003 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC1A3P43003 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC1A3P43003 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC1A3P43003 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC1A3P43003 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SLC1A3P43003 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
SLC1A3P43003 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SLC1A3P43003 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.33■□□□□ 0.53
SLC1A3P43003 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SLC1A3P43003 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SLC1A3P43003 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
SLC1A3P43003 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC18.33■□□□□ 0.52
SLC1A3P43003 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
SLC1A3P43003 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.33■□□□□ 0.52
SLC1A3P43003 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.33■□□□□ 0.52
SLC1A3P43003 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.33■□□□□ 0.52
SLC1A3P43003 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.33■□□□□ 0.52
SLC1A3P43003 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SLC1A3P43003 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.33■□□□□ 0.52
SLC1A3P43003 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SLC1A3P43003 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
SLC1A3P43003 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SLC1A3P43003 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
SLC1A3P43003 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.33■□□□□ 0.52
SLC1A3P43003 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SLC1A3P43003 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC1A3P43003 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC1A3P43003 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC1A3P43003 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
SLC1A3P43003 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
SLC1A3P43003 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
SLC1A3P43003 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
SLC1A3P43003 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.32■□□□□ 0.52
SLC1A3P43003 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
SLC1A3P43003 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SLC1A3P43003 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC1A3P43003 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.32■□□□□ 0.52
SLC1A3P43003 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC18.32■□□□□ 0.52
SLC1A3P43003 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC1A3P43003 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC1A3P43003 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC1A3P43003 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms