Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TNFSF9P41273 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TNFSF9P41273 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TNFSF9P41273 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC21.67■■□□□ 1.06
TNFSF9P41273 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TNFSF9P41273 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
TNFSF9P41273 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
TNFSF9P41273 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TNFSF9P41273 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TNFSF9P41273 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC21.67■■□□□ 1.06
TNFSF9P41273 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TNFSF9P41273 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
TNFSF9P41273 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TNFSF9P41273 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TNFSF9P41273 BX119927.1-201ENST00000636596 1552 ntBASIC21.66■■□□□ 1.06
TNFSF9P41273 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC21.66■■□□□ 1.06
TNFSF9P41273 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC21.66■■□□□ 1.06
TNFSF9P41273 RN7SL471P-201ENST00000580476 299 ntBASIC21.66■■□□□ 1.06
TNFSF9P41273 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC21.66■■□□□ 1.06
TNFSF9P41273 MTDHP1-201ENST00000605323 784 ntBASIC21.66■■□□□ 1.06
TNFSF9P41273 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC21.66■■□□□ 1.06
TNFSF9P41273 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC21.66■■□□□ 1.06
TNFSF9P41273 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TNFSF9P41273 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TNFSF9P41273 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC21.66■■□□□ 1.06
TNFSF9P41273 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TNFSF9P41273 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TNFSF9P41273 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
TNFSF9P41273 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TNFSF9P41273 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC21.65■■□□□ 1.06
TNFSF9P41273 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC21.65■■□□□ 1.06
TNFSF9P41273 GCSHP5-201ENST00000443090 522 ntBASIC21.65■■□□□ 1.06
TNFSF9P41273 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC21.65■■□□□ 1.06
TNFSF9P41273 C1QBPP2-201ENST00000528754 825 ntBASIC21.65■■□□□ 1.06
TNFSF9P41273 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
TNFSF9P41273 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC21.65■■□□□ 1.06
TNFSF9P41273 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC21.65■■□□□ 1.06
TNFSF9P41273 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC21.65■■□□□ 1.06
TNFSF9P41273 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TNFSF9P41273 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TNFSF9P41273 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
TNFSF9P41273 PKD1P6-201ENST00000343738 4769 ntBASIC21.65■■□□□ 1.06
TNFSF9P41273 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TNFSF9P41273 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC21.65■■□□□ 1.06
TNFSF9P41273 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.65■■□□□ 1.06
TNFSF9P41273 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
TNFSF9P41273 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC21.65■■□□□ 1.06
TNFSF9P41273 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC21.65■■□□□ 1.06
TNFSF9P41273 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
TNFSF9P41273 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
TNFSF9P41273 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC21.64■■□□□ 1.05
TNFSF9P41273 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.64■■□□□ 1.05
TNFSF9P41273 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TNFSF9P41273 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
TNFSF9P41273 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC21.64■■□□□ 1.05
TNFSF9P41273 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TNFSF9P41273 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TNFSF9P41273 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
TNFSF9P41273 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
TNFSF9P41273 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC21.64■■□□□ 1.05
TNFSF9P41273 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC21.64■■□□□ 1.05
TNFSF9P41273 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TNFSF9P41273 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC21.64■■□□□ 1.05
TNFSF9P41273 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TNFSF9P41273 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
TNFSF9P41273 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
TNFSF9P41273 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC21.64■■□□□ 1.05
TNFSF9P41273 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
TNFSF9P41273 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TNFSF9P41273 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TNFSF9P41273 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC21.63■■□□□ 1.05
TNFSF9P41273 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
TNFSF9P41273 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TNFSF9P41273 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TNFSF9P41273 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC21.63■■□□□ 1.05
TNFSF9P41273 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TNFSF9P41273 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TNFSF9P41273 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC21.63■■□□□ 1.05
TNFSF9P41273 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC21.63■■□□□ 1.05
TNFSF9P41273 AL158047.1-201ENST00000445918 881 ntBASIC21.63■■□□□ 1.05
TNFSF9P41273 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC21.63■■□□□ 1.05
TNFSF9P41273 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TNFSF9P41273 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC21.63■■□□□ 1.05
TNFSF9P41273 AC142381.4-202ENST00000563973 229 ntBASIC21.63■■□□□ 1.05
TNFSF9P41273 AL359736.2-201ENST00000621992 437 ntBASIC21.63■■□□□ 1.05
TNFSF9P41273 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC21.63■■□□□ 1.05
TNFSF9P41273 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TNFSF9P41273 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TNFSF9P41273 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TNFSF9P41273 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC21.63■■□□□ 1.05
TNFSF9P41273 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.63■■□□□ 1.05
TNFSF9P41273 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TNFSF9P41273 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TNFSF9P41273 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TNFSF9P41273 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC21.62■■□□□ 1.05
TNFSF9P41273 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TNFSF9P41273 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TNFSF9P41273 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC21.62■■□□□ 1.05
TNFSF9P41273 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
TNFSF9P41273 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms