Protein–RNA interactions for Protein: P41229

KDM5C, Lysine-specific demethylase 5C, humanhuman

Predictions only

Length 1,560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5CP41229 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC30.15■■■□□ 2.42
KDM5CP41229 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC30.14■■■□□ 2.42
KDM5CP41229 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
KDM5CP41229 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC30.14■■■□□ 2.42
KDM5CP41229 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
KDM5CP41229 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC30.14■■■□□ 2.42
KDM5CP41229 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC30.14■■■□□ 2.42
KDM5CP41229 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC30.14■■■□□ 2.42
KDM5CP41229 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC30.14■■■□□ 2.42
KDM5CP41229 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC30.14■■■□□ 2.42
KDM5CP41229 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC30.14■■■□□ 2.42
KDM5CP41229 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC30.14■■■□□ 2.42
KDM5CP41229 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC30.14■■■□□ 2.42
KDM5CP41229 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC30.14■■■□□ 2.42
KDM5CP41229 PARN-205ENST00000539279 1557 ntTSL 2 BASIC30.14■■■□□ 2.42
KDM5CP41229 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC30.14■■■□□ 2.41
KDM5CP41229 PALM-207ENST00000590161 2137 ntTSL 4 BASIC30.13■■■□□ 2.41
KDM5CP41229 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC30.13■■■□□ 2.41
KDM5CP41229 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
KDM5CP41229 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
KDM5CP41229 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC30.13■■■□□ 2.41
KDM5CP41229 STAC-204ENST00000457375 1366 ntTSL 2 BASIC30.13■■■□□ 2.41
KDM5CP41229 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
KDM5CP41229 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC30.13■■■□□ 2.41
KDM5CP41229 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC30.13■■■□□ 2.41
KDM5CP41229 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC30.13■■■□□ 2.41
KDM5CP41229 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC30.13■■■□□ 2.41
KDM5CP41229 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC30.13■■■□□ 2.41
KDM5CP41229 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC30.13■■■□□ 2.41
KDM5CP41229 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
KDM5CP41229 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC30.13■■■□□ 2.41
KDM5CP41229 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
KDM5CP41229 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
KDM5CP41229 AK4P3-201ENST00000418260 669 ntBASIC30.12■■■□□ 2.41
KDM5CP41229 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC30.12■■■□□ 2.41
KDM5CP41229 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC30.12■■■□□ 2.41
KDM5CP41229 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC30.12■■■□□ 2.41
KDM5CP41229 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC30.12■■■□□ 2.41
KDM5CP41229 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC30.12■■■□□ 2.41
KDM5CP41229 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
KDM5CP41229 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
KDM5CP41229 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC30.12■■■□□ 2.41
KDM5CP41229 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
KDM5CP41229 INGX-201ENST00000359239 846 ntBASIC30.11■■■□□ 2.41
KDM5CP41229 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC30.11■■■□□ 2.41
KDM5CP41229 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC30.11■■■□□ 2.41
KDM5CP41229 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
KDM5CP41229 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC30.11■■■□□ 2.41
KDM5CP41229 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC30.11■■■□□ 2.41
KDM5CP41229 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC30.11■■■□□ 2.41
KDM5CP41229 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC30.11■■■□□ 2.41
KDM5CP41229 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC30.11■■■□□ 2.41
KDM5CP41229 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC30.11■■■□□ 2.41
KDM5CP41229 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
KDM5CP41229 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC30.11■■■□□ 2.41
KDM5CP41229 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC30.11■■■□□ 2.41
KDM5CP41229 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
KDM5CP41229 AC004980.1-204ENST00000429707 299 ntBASIC30.11■■■□□ 2.41
KDM5CP41229 AL121894.2-201ENST00000602977 491 ntBASIC30.11■■■□□ 2.41
KDM5CP41229 AC091076.1-201ENST00000610741 619 ntBASIC30.11■■■□□ 2.41
KDM5CP41229 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
KDM5CP41229 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC30.11■■■□□ 2.41
KDM5CP41229 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
KDM5CP41229 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
KDM5CP41229 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
KDM5CP41229 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
KDM5CP41229 LIN28AP1-201ENST00000429574 405 ntBASIC30.1■■■□□ 2.41
KDM5CP41229 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC30.1■■■□□ 2.41
KDM5CP41229 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC30.1■■■□□ 2.41
KDM5CP41229 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC30.1■■■□□ 2.41
KDM5CP41229 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC30.1■■■□□ 2.41
KDM5CP41229 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
KDM5CP41229 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
KDM5CP41229 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
KDM5CP41229 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC30.1■■■□□ 2.41
KDM5CP41229 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
KDM5CP41229 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
KDM5CP41229 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC30.09■■■□□ 2.41
KDM5CP41229 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC30.09■■■□□ 2.41
KDM5CP41229 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
KDM5CP41229 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC30.09■■■□□ 2.41
KDM5CP41229 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC30.09■■■□□ 2.41
KDM5CP41229 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
KDM5CP41229 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC30.08■■■□□ 2.41
KDM5CP41229 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
KDM5CP41229 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC30.08■■■□□ 2.41
KDM5CP41229 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
KDM5CP41229 AL031133.1-201ENST00000406807 723 ntBASIC30.08■■■□□ 2.41
KDM5CP41229 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC30.08■■■□□ 2.41
KDM5CP41229 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC30.08■■■□□ 2.41
KDM5CP41229 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC30.08■■■□□ 2.41
KDM5CP41229 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC30.08■■■□□ 2.41
KDM5CP41229 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
KDM5CP41229 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC30.08■■■□□ 2.41
KDM5CP41229 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC30.08■■■□□ 2.41
KDM5CP41229 EP400NL-214ENST00000641289 2402 ntBASIC30.08■■■□□ 2.41
KDM5CP41229 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
KDM5CP41229 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC30.08■■■□□ 2.41
KDM5CP41229 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC30.08■■■□□ 2.41
KDM5CP41229 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms