Protein–RNA interactions for Protein: P40505

SDS3, Transcriptional regulatory protein SDS3, yeastyeast

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SDS3P40505 YAR009CYAR009C 3591 nt1.6□□□□□ -2.15
SDS3P40505 PAU12YGR294W 363 nt1.6□□□□□ -2.15
SDS3P40505 snR14snR14 160 nt1.6□□□□□ -2.15
SDS3P40505 PAU24YBR301W 363 nt1.6□□□□□ -2.15
SDS3P40505 SLX4YLR135W 2247 nt1.6□□□□□ -2.15
SDS3P40505 SEC21YNL287W 2808 nt1.6□□□□□ -2.15
SDS3P40505 YML002WYML002W 2214 nt1.59□□□□□ -2.15
SDS3P40505 SMC4YLR086W 4257 nt1.59□□□□□ -2.15
SDS3P40505 snR81snR81 201 nt1.58□□□□□ -2.16
SDS3P40505 EMC5YIL027C 426 nt1.58□□□□□ -2.16
SDS3P40505 ALY2YJL084C 3141 nt1.58□□□□□ -2.16
SDS3P40505 FYV8YGR196C 2454 nt1.58□□□□□ -2.16
SDS3P40505 PAN2YGL094C 3348 nt1.58□□□□□ -2.16
SDS3P40505 CCH1YGR217W 6120 nt1.57□□□□□ -2.16
SDS3P40505 FYV10YIL097W 1551 nt1.55□□□□□ -2.16
SDS3P40505 KCS1YDR017C 3153 nt1.55□□□□□ -2.16
SDS3P40505 HKR1YDR420W 5409 nt1.55□□□□□ -2.16
SDS3P40505 PET127YOR017W 2403 nt1.55□□□□□ -2.16
SDS3P40505 YGR130CYGR130C 2451 nt1.55□□□□□ -2.16
SDS3P40505 COG6YNL041C 2520 nt1.55□□□□□ -2.16
SDS3P40505 YDR210WYDR210W 228 nt1.54□□□□□ -2.16
SDS3P40505 MON2YNL297C 4911 nt1.54□□□□□ -2.16
SDS3P40505 YJL127W-AYJL127W-A 117 nt1.53□□□□□ -2.16
SDS3P40505 YLR232WYLR232W 348 nt1.53□□□□□ -2.16
SDS3P40505 KAP120YPL125W 3099 nt1.53□□□□□ -2.17
SDS3P40505 YNL284C-BYNL284C-B 5268 nt1.52□□□□□ -2.17
SDS3P40505 YLR041WYLR041W 321 nt1.52□□□□□ -2.17
SDS3P40505 GEA2YEL022W 4380 nt1.51□□□□□ -2.17
SDS3P40505 NOP9YJL010C 2001 nt1.51□□□□□ -2.17
SDS3P40505 STO1YMR125W 2586 nt1.51□□□□□ -2.17
SDS3P40505 BIR1YJR089W 2865 nt1.51□□□□□ -2.17
SDS3P40505 tQ(UUG)E2tQ(UUG)E2 72 nt1.5□□□□□ -2.17
SDS3P40505 YAL037C-AYAL037C-A 93 nt1.5□□□□□ -2.17
SDS3P40505 snR190snR190 190 nt1.5□□□□□ -2.17
SDS3P40505 YNL266WYNL266W 420 nt1.49□□□□□ -2.17
SDS3P40505 YBR072C-AYBR072C-A 162 nt1.49□□□□□ -2.17
SDS3P40505 KAP122YGL016W 3246 nt1.48□□□□□ -2.17
SDS3P40505 SET3YKR029C 2256 nt1.48□□□□□ -2.17
SDS3P40505 SKI3YPR189W 4299 nt1.48□□□□□ -2.17
SDS3P40505 WAR1YML076C 2835 nt1.47□□□□□ -2.17
SDS3P40505 SEC1YDR164C 2175 nt1.47□□□□□ -2.17
SDS3P40505 YGR146C-AYGR146C-A 162 nt1.46□□□□□ -2.18
SDS3P40505 NUP145YGL092W 3954 nt1.44□□□□□ -2.18
SDS3P40505 PIK1YNL267W 3201 nt1.44□□□□□ -2.18
SDS3P40505 RPL26BYGR034W 384 nt1.44□□□□□ -2.18
SDS3P40505 YOL083C-AYOL083C-A 141 nt1.44□□□□□ -2.18
SDS3P40505 snR62snR62 100 nt1.43□□□□□ -2.18
SDS3P40505 ASE1YOR058C 2658 nt1.43□□□□□ -2.18
SDS3P40505 RAD9YDR217C 3930 nt1.41□□□□□ -2.18
SDS3P40505 TRM732YMR259C 4263 nt1.4□□□□□ -2.18
SDS3P40505 APL3YBL037W 3078 nt1.4□□□□□ -2.19
SDS3P40505 YBL071C-BYBL071C-B 99 nt1.39□□□□□ -2.19
SDS3P40505 BST1YFL025C 3090 nt1.38□□□□□ -2.19
SDS3P40505 CDC25YLR310C 4770 nt1.37□□□□□ -2.19
SDS3P40505 tH(GUG)E1tH(GUG)E1 72 nt1.36□□□□□ -2.19
SDS3P40505 tH(GUG)E2tH(GUG)E2 72 nt1.36□□□□□ -2.19
SDS3P40505 tH(GUG)G1tH(GUG)G1 72 nt1.36□□□□□ -2.19
SDS3P40505 tH(GUG)G2tH(GUG)G2 72 nt1.36□□□□□ -2.19
SDS3P40505 tH(GUG)HtH(GUG)H 72 nt1.36□□□□□ -2.19
SDS3P40505 tH(GUG)KtH(GUG)K 72 nt1.36□□□□□ -2.19
SDS3P40505 tH(GUG)MtH(GUG)M 72 nt1.36□□□□□ -2.19
SDS3P40505 NST1YNL091W 3723 nt1.35□□□□□ -2.19
SDS3P40505 YBR200W-AYBR200W-A 165 nt1.35□□□□□ -2.19
SDS3P40505 PRP16YKR086W 3216 nt1.35□□□□□ -2.19
SDS3P40505 YPR117WYPR117W 7470 nt1.35□□□□□ -2.19
SDS3P40505 NUP188YML103C 4968 nt1.35□□□□□ -2.19
SDS3P40505 SWI4YER111C 3282 nt1.34□□□□□ -2.19
SDS3P40505 BEM3YPL115C 3387 nt1.34□□□□□ -2.19
SDS3P40505 IML1YJR138W 4755 nt1.34□□□□□ -2.19
SDS3P40505 MSN5YDR335W 3675 nt1.34□□□□□ -2.2
SDS3P40505 tN(GUU)QtN(GUU)Q 71 nt1.33□□□□□ -2.2
SDS3P40505 YBR196C-AYBR196C-A 150 nt1.33□□□□□ -2.2
SDS3P40505 YDL073WYDL073W 2955 nt1.33□□□□□ -2.2
SDS3P40505 CLU1YMR012W 3834 nt1.33□□□□□ -2.2
SDS3P40505 YDR034C-AYDR034C-A 177 nt1.32□□□□□ -2.2
SDS3P40505 UBP3YER151C 2739 nt1.31□□□□□ -2.2
SDS3P40505 YCS4YLR272C 3531 nt1.31□□□□□ -2.2
SDS3P40505 SEC8YPR055W 3198 nt1.31□□□□□ -2.2
SDS3P40505 AZF1YOR113W 2745 nt1.3□□□□□ -2.2
SDS3P40505 RPS26AYGL189C 360 nt1.3□□□□□ -2.2
SDS3P40505 YOL164W-AYOL164W-A 183 nt1.3□□□□□ -2.2
SDS3P40505 SEC3YER008C 4011 nt1.3□□□□□ -2.2
SDS3P40505 SEC10YLR166C 2616 nt1.29□□□□□ -2.2
SDS3P40505 tF(GAA)BtF(GAA)B 73 nt1.28□□□□□ -2.2
SDS3P40505 tF(GAA)FtF(GAA)F 73 nt1.28□□□□□ -2.2
SDS3P40505 tF(GAA)GtF(GAA)G 73 nt1.28□□□□□ -2.2
SDS3P40505 tF(GAA)H1tF(GAA)H1 73 nt1.28□□□□□ -2.2
SDS3P40505 tF(GAA)H2tF(GAA)H2 73 nt1.28□□□□□ -2.2
SDS3P40505 tF(GAA)MtF(GAA)M 73 nt1.28□□□□□ -2.2
SDS3P40505 tF(GAA)P1tF(GAA)P1 73 nt1.28□□□□□ -2.2
SDS3P40505 tF(GAA)P2tF(GAA)P2 73 nt1.28□□□□□ -2.2
SDS3P40505 tV(UAC)BtV(UAC)B 74 nt1.28□□□□□ -2.2
SDS3P40505 tV(UAC)DtV(UAC)D 74 nt1.28□□□□□ -2.2
SDS3P40505 NNF2YGR089W 2811 nt1.27□□□□□ -2.21
SDS3P40505 CDC39YCR093W 6327 nt1.27□□□□□ -2.21
SDS3P40505 YBL100W-CYBL100W-C 120 nt1.27□□□□□ -2.21
SDS3P40505 EST2YLR318W 2655 nt1.26□□□□□ -2.21
SDS3P40505 YGR240C-AYGR240C-A 201 nt1.25□□□□□ -2.21
SDS3P40505 YPR160W-AYPR160W-A 81 nt1.25□□□□□ -2.21
SDS3P40505 YLR399W-AYLR399W-A 105 nt1.24□□□□□ -2.21
Retrieved 100 of 7,029 protein–RNA pairs in 94 ms