Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 NXN-202ENST00000537628 1340 ntTSL 3 BASIC21.06■□□□□ 0.96
RFC1P35251 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RFC1P35251 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
RFC1P35251 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC21.06■□□□□ 0.96
RFC1P35251 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RFC1P35251 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RFC1P35251 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC21.06■□□□□ 0.96
RFC1P35251 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC21.06■□□□□ 0.96
RFC1P35251 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC21.06■□□□□ 0.96
RFC1P35251 GPX1P1-201ENST00000388829 606 ntBASIC21.06■□□□□ 0.96
RFC1P35251 TSPY6P-201ENST00000448518 926 ntBASIC21.06■□□□□ 0.96
RFC1P35251 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
RFC1P35251 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
RFC1P35251 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RFC1P35251 GXYLT1P5-201ENST00000614548 1189 ntBASIC21.06■□□□□ 0.96
RFC1P35251 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RFC1P35251 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RFC1P35251 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
RFC1P35251 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RFC1P35251 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RFC1P35251 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC21.06■□□□□ 0.96
RFC1P35251 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RFC1P35251 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC21.05■□□□□ 0.96
RFC1P35251 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC21.05■□□□□ 0.96
RFC1P35251 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RFC1P35251 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
RFC1P35251 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RFC1P35251 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC21.05■□□□□ 0.96
RFC1P35251 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC21.05■□□□□ 0.96
RFC1P35251 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RFC1P35251 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
RFC1P35251 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC21.05■□□□□ 0.96
RFC1P35251 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RFC1P35251 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RFC1P35251 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RFC1P35251 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RFC1P35251 KRT8P17-201ENST00000453110 1448 ntBASIC21.04■□□□□ 0.96
RFC1P35251 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RFC1P35251 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC21.04■□□□□ 0.96
RFC1P35251 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RFC1P35251 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC21.04■□□□□ 0.96
RFC1P35251 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RFC1P35251 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC21.04■□□□□ 0.96
RFC1P35251 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
RFC1P35251 HES2-205ENST00000487437 968 ntTSL 3 BASIC21.04■□□□□ 0.96
RFC1P35251 AC090192.1-201ENST00000517740 490 ntBASIC21.04■□□□□ 0.96
RFC1P35251 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC21.04■□□□□ 0.96
RFC1P35251 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC21.04■□□□□ 0.96
RFC1P35251 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RFC1P35251 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RFC1P35251 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
RFC1P35251 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RFC1P35251 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
RFC1P35251 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RFC1P35251 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RFC1P35251 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RFC1P35251 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
RFC1P35251 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC21.03■□□□□ 0.96
RFC1P35251 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC21.03■□□□□ 0.96
RFC1P35251 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RFC1P35251 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC21.03■□□□□ 0.96
RFC1P35251 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC21.03■□□□□ 0.96
RFC1P35251 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC21.03■□□□□ 0.96
RFC1P35251 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
RFC1P35251 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RFC1P35251 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RFC1P35251 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RFC1P35251 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
RFC1P35251 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RFC1P35251 ADM-207ENST00000530439 1839 ntTSL 2 BASIC21.02■□□□□ 0.96
RFC1P35251 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RFC1P35251 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RFC1P35251 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RFC1P35251 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC21.02■□□□□ 0.96
RFC1P35251 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC21.02■□□□□ 0.96
RFC1P35251 OR2A1-AS1-201ENST00000462305 773 ntBASIC21.02■□□□□ 0.96
RFC1P35251 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC21.02■□□□□ 0.96
RFC1P35251 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC21.02■□□□□ 0.96
RFC1P35251 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
RFC1P35251 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RFC1P35251 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
RFC1P35251 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
RFC1P35251 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
RFC1P35251 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
RFC1P35251 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.95
RFC1P35251 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC21.02■□□□□ 0.95
RFC1P35251 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC21.01■□□□□ 0.95
RFC1P35251 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RFC1P35251 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RFC1P35251 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RFC1P35251 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RFC1P35251 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
RFC1P35251 SLC29A4P1-201ENST00000398760 971 ntBASIC21.01■□□□□ 0.95
RFC1P35251 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC21.01■□□□□ 0.95
RFC1P35251 CD37-204ENST00000535669 1674 ntTSL 2 BASIC21.01■□□□□ 0.95
RFC1P35251 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
RFC1P35251 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
RFC1P35251 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC21.01■□□□□ 0.95
RFC1P35251 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC21.01■□□□□ 0.95
RFC1P35251 BID-204ENST00000399767 2129 ntTSL 2 BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms