Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CTNNA1P35221 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CTNNA1P35221 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC21.07■□□□□ 0.96
CTNNA1P35221 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
CTNNA1P35221 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC21.07■□□□□ 0.96
CTNNA1P35221 AL158211.5-201ENST00000623583 2518 ntBASIC21.07■□□□□ 0.96
CTNNA1P35221 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CTNNA1P35221 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
CTNNA1P35221 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC21.07■□□□□ 0.96
CTNNA1P35221 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CTNNA1P35221 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC21.07■□□□□ 0.96
CTNNA1P35221 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC21.07■□□□□ 0.96
CTNNA1P35221 NTF6G-201ENST00000591094 616 ntBASIC21.07■□□□□ 0.96
CTNNA1P35221 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC21.07■□□□□ 0.96
CTNNA1P35221 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CTNNA1P35221 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CTNNA1P35221 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CTNNA1P35221 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CTNNA1P35221 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
CTNNA1P35221 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CTNNA1P35221 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
CTNNA1P35221 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CTNNA1P35221 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC21.06■□□□□ 0.96
CTNNA1P35221 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CTNNA1P35221 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CTNNA1P35221 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC21.06■□□□□ 0.96
CTNNA1P35221 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC21.06■□□□□ 0.96
CTNNA1P35221 AL162412.1-201ENST00000567129 965 ntBASIC21.06■□□□□ 0.96
CTNNA1P35221 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.06■□□□□ 0.96
CTNNA1P35221 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CTNNA1P35221 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CTNNA1P35221 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CTNNA1P35221 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
CTNNA1P35221 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CTNNA1P35221 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC21.05■□□□□ 0.96
CTNNA1P35221 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CTNNA1P35221 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CTNNA1P35221 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
CTNNA1P35221 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC21.05■□□□□ 0.96
CTNNA1P35221 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC21.05■□□□□ 0.96
CTNNA1P35221 AC007322.4-201ENST00000509611 723 ntBASIC21.05■□□□□ 0.96
CTNNA1P35221 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC21.05■□□□□ 0.96
CTNNA1P35221 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CTNNA1P35221 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CTNNA1P35221 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CTNNA1P35221 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CTNNA1P35221 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC21.05■□□□□ 0.96
CTNNA1P35221 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
CTNNA1P35221 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC21.04■□□□□ 0.96
CTNNA1P35221 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CTNNA1P35221 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC21.04■□□□□ 0.96
CTNNA1P35221 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CTNNA1P35221 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC21.04■□□□□ 0.96
CTNNA1P35221 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC21.04■□□□□ 0.96
CTNNA1P35221 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC21.04■□□□□ 0.96
CTNNA1P35221 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
CTNNA1P35221 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC21.04■□□□□ 0.96
CTNNA1P35221 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC21.04■□□□□ 0.96
CTNNA1P35221 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CTNNA1P35221 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
CTNNA1P35221 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CTNNA1P35221 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC21.04■□□□□ 0.96
CTNNA1P35221 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CTNNA1P35221 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC21.04■□□□□ 0.96
CTNNA1P35221 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC21.04■□□□□ 0.96
CTNNA1P35221 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
CTNNA1P35221 STK25-205ENST00000405883 1904 ntTSL 2 BASIC21.04■□□□□ 0.96
CTNNA1P35221 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
CTNNA1P35221 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CTNNA1P35221 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
CTNNA1P35221 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CTNNA1P35221 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CTNNA1P35221 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
CTNNA1P35221 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CTNNA1P35221 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC21.03■□□□□ 0.96
CTNNA1P35221 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CTNNA1P35221 AC034268.1-201ENST00000441047 882 ntBASIC21.03■□□□□ 0.96
CTNNA1P35221 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CTNNA1P35221 AC016405.3-201ENST00000607710 860 ntBASIC21.03■□□□□ 0.96
CTNNA1P35221 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CTNNA1P35221 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CTNNA1P35221 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC21.03■□□□□ 0.96
CTNNA1P35221 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CTNNA1P35221 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CTNNA1P35221 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
CTNNA1P35221 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
CTNNA1P35221 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
CTNNA1P35221 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CTNNA1P35221 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CTNNA1P35221 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CTNNA1P35221 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.96
CTNNA1P35221 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CTNNA1P35221 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CTNNA1P35221 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CTNNA1P35221 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CTNNA1P35221 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC21.02■□□□□ 0.96
CTNNA1P35221 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CTNNA1P35221 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CTNNA1P35221 STX7-201ENST00000367937 1090 ntTSL 5 BASIC21.02■□□□□ 0.96
CTNNA1P35221 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms