Protein–RNA interactions for Protein: P33203

PRP40, Pre-mRNA-processing protein PRP40, yeastyeast

Known RBP Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PRP40P33203 IML1YJR138W 4755 nt1.88□□□□□ -2.11
PRP40P33203 MON2YNL297C 4911 nt1.86□□□□□ -2.11
PRP40P33203 CDC25YLR310C 4770 nt1.86□□□□□ -2.11
PRP40P33203 WAR1YML076C 2835 nt1.85□□□□□ -2.11
PRP40P33203 ROM2YLR371W 4071 nt1.85□□□□□ -2.11
PRP40P33203 SWI4YER111C 3282 nt1.84□□□□□ -2.11
PRP40P33203 snR61snR61 90 nt1.84□□□□□ -2.11
PRP40P33203 YLR041WYLR041W 321 nt1.84□□□□□ -2.11
PRP40P33203 YNL284C-BYNL284C-B 5268 nt1.83□□□□□ -2.12
PRP40P33203 PIK1YNL267W 3201 nt1.83□□□□□ -2.12
PRP40P33203 PKH3YDR466W 2697 nt1.83□□□□□ -2.12
PRP40P33203 RPL26BYGR034W 384 nt1.83□□□□□ -2.12
PRP40P33203 SEC21YNL287W 2808 nt1.83□□□□□ -2.12
PRP40P33203 snR190snR190 190 nt1.82□□□□□ -2.12
PRP40P33203 FYV10YIL097W 1551 nt1.81□□□□□ -2.12
PRP40P33203 NUP145YGL092W 3954 nt1.81□□□□□ -2.12
PRP40P33203 BST1YFL025C 3090 nt1.8□□□□□ -2.12
PRP40P33203 tH(GUG)E1tH(GUG)E1 72 nt1.8□□□□□ -2.12
PRP40P33203 tH(GUG)E2tH(GUG)E2 72 nt1.8□□□□□ -2.12
PRP40P33203 tH(GUG)G1tH(GUG)G1 72 nt1.8□□□□□ -2.12
PRP40P33203 tH(GUG)G2tH(GUG)G2 72 nt1.8□□□□□ -2.12
PRP40P33203 tH(GUG)HtH(GUG)H 72 nt1.8□□□□□ -2.12
PRP40P33203 tH(GUG)KtH(GUG)K 72 nt1.8□□□□□ -2.12
PRP40P33203 tH(GUG)MtH(GUG)M 72 nt1.8□□□□□ -2.12
PRP40P33203 tM(CAU)Q2tM(CAU)Q2 78 nt1.8□□□□□ -2.12
PRP40P33203 YHR217CYHR217C 462 nt1.8□□□□□ -2.12
PRP40P33203 YLR232WYLR232W 348 nt1.8□□□□□ -2.12
PRP40P33203 snR39BsnR39B 96 nt1.8□□□□□ -2.12
PRP40P33203 APL3YBL037W 3078 nt1.8□□□□□ -2.12
PRP40P33203 YMR247W-AYMR247W-A 144 nt1.79□□□□□ -2.12
PRP40P33203 YBR200W-AYBR200W-A 165 nt1.79□□□□□ -2.12
PRP40P33203 SEC3YER008C 4011 nt1.78□□□□□ -2.12
PRP40P33203 YHR131W-AYHR131W-A 246 nt1.78□□□□□ -2.12
PRP40P33203 tT(UGU)HtT(UGU)H 72 nt1.77□□□□□ -2.13
PRP40P33203 NUP157YER105C 4176 nt1.76□□□□□ -2.13
PRP40P33203 ASE1YOR058C 2658 nt1.75□□□□□ -2.13
PRP40P33203 GEA2YEL022W 4380 nt1.75□□□□□ -2.13
PRP40P33203 RPM2YML091C 3609 nt1.75□□□□□ -2.13
PRP40P33203 TRM732YMR259C 4263 nt1.75□□□□□ -2.13
PRP40P33203 VPS15YBR097W 4365 nt1.74□□□□□ -2.13
PRP40P33203 SBH1YER087C-B 249 nt1.73□□□□□ -2.13
PRP40P33203 AZF1YOR113W 2745 nt1.73□□□□□ -2.13
PRP40P33203 tV(UAC)BtV(UAC)B 74 nt1.72□□□□□ -2.13
PRP40P33203 tV(UAC)DtV(UAC)D 74 nt1.72□□□□□ -2.13
PRP40P33203 RAD9YDR217C 3930 nt1.72□□□□□ -2.13
PRP40P33203 NUP188YML103C 4968 nt1.71□□□□□ -2.14
PRP40P33203 EST2YLR318W 2655 nt1.7□□□□□ -2.14
PRP40P33203 SEC8YPR055W 3198 nt1.68□□□□□ -2.14
PRP40P33203 YDL247W-AYDL247W-A 75 nt1.67□□□□□ -2.14
PRP40P33203 YJL127W-AYJL127W-A 117 nt1.66□□□□□ -2.14
PRP40P33203 YGL041C-BYGL041C-B 183 nt1.65□□□□□ -2.15
PRP40P33203 KAP120YPL125W 3099 nt1.65□□□□□ -2.15
PRP40P33203 YDR210WYDR210W 228 nt1.64□□□□□ -2.15
PRP40P33203 tF(GAA)BtF(GAA)B 73 nt1.64□□□□□ -2.15
PRP40P33203 tF(GAA)FtF(GAA)F 73 nt1.64□□□□□ -2.15
PRP40P33203 tF(GAA)GtF(GAA)G 73 nt1.64□□□□□ -2.15
PRP40P33203 tF(GAA)H1tF(GAA)H1 73 nt1.64□□□□□ -2.15
PRP40P33203 tF(GAA)H2tF(GAA)H2 73 nt1.64□□□□□ -2.15
PRP40P33203 tF(GAA)MtF(GAA)M 73 nt1.64□□□□□ -2.15
PRP40P33203 tF(GAA)P1tF(GAA)P1 73 nt1.64□□□□□ -2.15
PRP40P33203 tF(GAA)P2tF(GAA)P2 73 nt1.64□□□□□ -2.15
PRP40P33203 COG6YNL041C 2520 nt1.64□□□□□ -2.15
PRP40P33203 MSN5YDR335W 3675 nt1.63□□□□□ -2.15
PRP40P33203 YGR146C-AYGR146C-A 162 nt1.62□□□□□ -2.15
PRP40P33203 YLR399W-AYLR399W-A 105 nt1.62□□□□□ -2.15
PRP40P33203 PRP16YKR086W 3216 nt1.61□□□□□ -2.15
PRP40P33203 FYV8YGR196C 2454 nt1.6□□□□□ -2.15
PRP40P33203 RCO1YMR075W 2055 nt1.59□□□□□ -2.15
PRP40P33203 SIP4YJL089W 2490 nt1.59□□□□□ -2.16
PRP40P33203 BEM3YPL115C 3387 nt1.58□□□□□ -2.16
PRP40P33203 BIR1YJR089W 2865 nt1.58□□□□□ -2.16
PRP40P33203 YPR160W-AYPR160W-A 81 nt1.57□□□□□ -2.16
PRP40P33203 CDC39YCR093W 6327 nt1.57□□□□□ -2.16
PRP40P33203 IRA1YBR140C 9279 nt1.56□□□□□ -2.16
PRP40P33203 SEC1YDR164C 2175 nt1.55□□□□□ -2.16
PRP40P33203 tQ(UUG)E2tQ(UUG)E2 72 nt1.54□□□□□ -2.16
PRP40P33203 YSP1YHR155W 3687 nt1.54□□□□□ -2.16
PRP40P33203 UTP20YBL004W 7482 nt1.54□□□□□ -2.16
PRP40P33203 UBP3YER151C 2739 nt1.53□□□□□ -2.16
PRP40P33203 SPC110YDR356W 2835 nt1.53□□□□□ -2.16
PRP40P33203 tN(GUU)QtN(GUU)Q 71 nt1.53□□□□□ -2.16
PRP40P33203 YNL266WYNL266W 420 nt1.53□□□□□ -2.16
PRP40P33203 YDL073WYDL073W 2955 nt1.53□□□□□ -2.17
PRP40P33203 DOP1YDR141C 5097 nt1.52□□□□□ -2.17
PRP40P33203 PET127YOR017W 2403 nt1.49□□□□□ -2.17
PRP40P33203 HKR1YDR420W 5409 nt1.48□□□□□ -2.17
PRP40P33203 YBR072C-AYBR072C-A 162 nt1.48□□□□□ -2.17
PRP40P33203 ULP2YIL031W 3105 nt1.46□□□□□ -2.18
PRP40P33203 GLG1YKR058W 1851 nt1.44□□□□□ -2.18
PRP40P33203 snR81snR81 201 nt1.42□□□□□ -2.18
PRP40P33203 YAL037C-AYAL037C-A 93 nt1.42□□□□□ -2.18
PRP40P33203 YOL014WYOL014W 375 nt1.4□□□□□ -2.19
PRP40P33203 tS(GCU)Q1tS(GCU)Q1 86 nt1.39□□□□□ -2.19
PRP40P33203 NNF2YGR089W 2811 nt1.38□□□□□ -2.19
PRP40P33203 SPT7YBR081C 3999 nt1.36□□□□□ -2.19
PRP40P33203 YBR196C-AYBR196C-A 150 nt1.35□□□□□ -2.19
PRP40P33203 YIL142C-AYIL142C-A 333 nt1.34□□□□□ -2.19
PRP40P33203 SEC10YLR166C 2616 nt1.33□□□□□ -2.2
PRP40P33203 BUD3YCL014W 4911 nt1.33□□□□□ -2.2
PRP40P33203 YOL083C-AYOL083C-A 141 nt1.29□□□□□ -2.2
Retrieved 100 of 7,029 protein–RNA pairs in 12.8 ms