Protein–RNA interactions for Protein: P31277

HOXD11, Homeobox protein Hox-D11, humanhuman

Predicted RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11P31277 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC21■□□□□ 0.95
HOXD11P31277 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
HOXD11P31277 AC068790.2-201ENST00000602601 557 ntBASIC21■□□□□ 0.95
HOXD11P31277 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC21■□□□□ 0.95
HOXD11P31277 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC21■□□□□ 0.95
HOXD11P31277 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC21■□□□□ 0.95
HOXD11P31277 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC21■□□□□ 0.95
HOXD11P31277 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
HOXD11P31277 AC010501.1-201ENST00000606270 1962 ntBASIC20.99■□□□□ 0.95
HOXD11P31277 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
HOXD11P31277 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.99■□□□□ 0.95
HOXD11P31277 SYT14P1-202ENST00000600441 1448 ntBASIC20.99■□□□□ 0.95
HOXD11P31277 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
HOXD11P31277 AL355143.1-201ENST00000407101 841 ntBASIC20.99■□□□□ 0.95
HOXD11P31277 LINC01715-201ENST00000420776 624 ntTSL 2 BASIC20.99■□□□□ 0.95
HOXD11P31277 MTATP6P11-201ENST00000428071 670 ntBASIC20.99■□□□□ 0.95
HOXD11P31277 AP000959.1-201ENST00000441759 977 ntTSL 3 BASIC20.99■□□□□ 0.95
HOXD11P31277 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC20.99■□□□□ 0.95
HOXD11P31277 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC20.99■□□□□ 0.95
HOXD11P31277 SNORA48.9-201ENST00000516419 162 ntBASIC20.99■□□□□ 0.95
HOXD11P31277 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC20.99■□□□□ 0.95
HOXD11P31277 AP001636.2-201ENST00000525517 696 ntBASIC20.99■□□□□ 0.95
HOXD11P31277 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC20.99■□□□□ 0.95
HOXD11P31277 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC20.99■□□□□ 0.95
HOXD11P31277 AC066613.2-201ENST00000561007 560 ntTSL 4 BASIC20.99■□□□□ 0.95
HOXD11P31277 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
HOXD11P31277 AP003071.4-201ENST00000562276 1284 ntBASIC20.99■□□□□ 0.95
HOXD11P31277 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HOXD11P31277 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.99■□□□□ 0.95
HOXD11P31277 ADAD1P2-201ENST00000588476 646 ntBASIC20.99■□□□□ 0.95
HOXD11P31277 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.99■□□□□ 0.95
HOXD11P31277 AC026471.5-201ENST00000615068 467 ntBASIC20.99■□□□□ 0.95
HOXD11P31277 Six3os1_6.1-201ENST00000620790 196 ntBASIC20.99■□□□□ 0.95
HOXD11P31277 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
HOXD11P31277 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HOXD11P31277 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
HOXD11P31277 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HOXD11P31277 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
HOXD11P31277 AC008040.1-204ENST00000469301 1738 ntTSL 2 BASIC20.98■□□□□ 0.95
HOXD11P31277 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HOXD11P31277 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
HOXD11P31277 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
HOXD11P31277 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HOXD11P31277 AF064858.1-201ENST00000417335 1412 ntTSL 5 BASIC20.98■□□□□ 0.95
HOXD11P31277 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.98■□□□□ 0.95
HOXD11P31277 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
HOXD11P31277 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HOXD11P31277 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
HOXD11P31277 AP000347.1-202ENST00000435868 847 ntBASIC20.98■□□□□ 0.95
HOXD11P31277 AL645638.1-201ENST00000440519 361 ntBASIC20.98■□□□□ 0.95
HOXD11P31277 AC009947.2-201ENST00000444014 672 ntBASIC20.98■□□□□ 0.95
HOXD11P31277 AC096736.3-201ENST00000510753 993 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
HOXD11P31277 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC20.98■□□□□ 0.95
HOXD11P31277 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC20.98■□□□□ 0.95
HOXD11P31277 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
HOXD11P31277 AC124016.1-201ENST00000609552 612 ntBASIC20.98■□□□□ 0.95
HOXD11P31277 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC20.98■□□□□ 0.95
HOXD11P31277 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC20.98■□□□□ 0.95
HOXD11P31277 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
HOXD11P31277 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.98■□□□□ 0.95
HOXD11P31277 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HOXD11P31277 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
HOXD11P31277 MTND4P10-201ENST00000446199 1363 ntBASIC20.97■□□□□ 0.95
HOXD11P31277 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
HOXD11P31277 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
HOXD11P31277 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
HOXD11P31277 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HOXD11P31277 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HOXD11P31277 POM121L13P-201ENST00000422362 380 ntBASIC20.97■□□□□ 0.95
HOXD11P31277 AC096638.2-201ENST00000434965 711 ntBASIC20.97■□□□□ 0.95
HOXD11P31277 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC20.97■□□□□ 0.95
HOXD11P31277 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20.97■□□□□ 0.95
HOXD11P31277 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC20.97■□□□□ 0.95
HOXD11P31277 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC20.97■□□□□ 0.95
HOXD11P31277 TPT1P8-201ENST00000510120 555 ntBASIC20.97■□□□□ 0.95
HOXD11P31277 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC20.97■□□□□ 0.95
HOXD11P31277 AC027176.2-201ENST00000559166 746 ntBASIC20.97■□□□□ 0.95
HOXD11P31277 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
HOXD11P31277 AL031963.3-201ENST00000606441 850 ntBASIC20.97■□□□□ 0.95
HOXD11P31277 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC20.97■□□□□ 0.95
HOXD11P31277 AC006946.3-201ENST00000609791 756 ntBASIC20.97■□□□□ 0.95
HOXD11P31277 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.97■□□□□ 0.95
HOXD11P31277 OR5AC4P-202ENST00000642086 985 ntBASIC20.97■□□□□ 0.95
HOXD11P31277 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC20.97■□□□□ 0.95
HOXD11P31277 AC106785.2-201ENST00000564385 1319 ntBASIC20.97■□□□□ 0.95
HOXD11P31277 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC20.97■□□□□ 0.95
HOXD11P31277 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HOXD11P31277 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
HOXD11P31277 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HOXD11P31277 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.96■□□□□ 0.95
HOXD11P31277 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC20.96■□□□□ 0.95
HOXD11P31277 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
HOXD11P31277 HDAC8-204ENST00000373560 819 ntTSL 3 BASIC20.96■□□□□ 0.95
HOXD11P31277 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
HOXD11P31277 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC20.96■□□□□ 0.95
HOXD11P31277 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HOXD11P31277 PVRIG2P-201ENST00000435460 978 ntBASIC20.96■□□□□ 0.95
HOXD11P31277 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC20.96■□□□□ 0.95
HOXD11P31277 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC20.96■□□□□ 0.95
HOXD11P31277 ONECUT1-202ENST00000560699 996 ntTSL 3 BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms