Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.29■□□□□ 0.52
SHC1P29353 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.29■□□□□ 0.52
SHC1P29353 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SHC1P29353 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
SHC1P29353 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SHC1P29353 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
SHC1P29353 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.29■□□□□ 0.52
SHC1P29353 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.29■□□□□ 0.52
SHC1P29353 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SHC1P29353 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SHC1P29353 PGM5P4-201ENST00000421970 445 ntBASIC18.29■□□□□ 0.52
SHC1P29353 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.29■□□□□ 0.52
SHC1P29353 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
SHC1P29353 AC069152.1-201ENST00000438030 544 ntBASIC18.29■□□□□ 0.52
SHC1P29353 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.29■□□□□ 0.52
SHC1P29353 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.29■□□□□ 0.52
SHC1P29353 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.29■□□□□ 0.52
SHC1P29353 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.29■□□□□ 0.52
SHC1P29353 MIR4758-201ENST00000577688 71 ntBASIC18.29■□□□□ 0.52
SHC1P29353 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SHC1P29353 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SHC1P29353 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SHC1P29353 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.29■□□□□ 0.52
SHC1P29353 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SHC1P29353 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
SHC1P29353 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SHC1P29353 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.29■□□□□ 0.52
SHC1P29353 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.28■□□□□ 0.52
SHC1P29353 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.28■□□□□ 0.52
SHC1P29353 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SHC1P29353 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.28■□□□□ 0.52
SHC1P29353 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SHC1P29353 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.28■□□□□ 0.52
SHC1P29353 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
SHC1P29353 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SHC1P29353 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SHC1P29353 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.28■□□□□ 0.52
SHC1P29353 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SHC1P29353 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.28■□□□□ 0.52
SHC1P29353 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SHC1P29353 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SHC1P29353 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SHC1P29353 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC18.28■□□□□ 0.52
SHC1P29353 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.28■□□□□ 0.52
SHC1P29353 AC091874.3-201ENST00000512672 1195 ntBASIC18.28■□□□□ 0.52
SHC1P29353 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.28■□□□□ 0.52
SHC1P29353 KLF13-207ENST00000560473 489 ntTSL 3 BASIC18.28■□□□□ 0.52
SHC1P29353 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.28■□□□□ 0.52
SHC1P29353 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.28■□□□□ 0.52
SHC1P29353 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
SHC1P29353 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.28■□□□□ 0.52
SHC1P29353 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.28■□□□□ 0.52
SHC1P29353 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
SHC1P29353 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SHC1P29353 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SHC1P29353 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SHC1P29353 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SHC1P29353 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SHC1P29353 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SHC1P29353 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SHC1P29353 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
SHC1P29353 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.27■□□□□ 0.52
SHC1P29353 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.27■□□□□ 0.52
SHC1P29353 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.27■□□□□ 0.52
SHC1P29353 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SHC1P29353 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.27■□□□□ 0.52
SHC1P29353 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SHC1P29353 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
SHC1P29353 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
SHC1P29353 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
SHC1P29353 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
SHC1P29353 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.27■□□□□ 0.52
SHC1P29353 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
SHC1P29353 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SHC1P29353 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
SHC1P29353 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.27■□□□□ 0.51
SHC1P29353 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.27■□□□□ 0.51
SHC1P29353 AL512408.1-201ENST00000569378 2000 ntBASIC18.27■□□□□ 0.51
SHC1P29353 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SHC1P29353 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SHC1P29353 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.26■□□□□ 0.51
SHC1P29353 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SHC1P29353 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.26■□□□□ 0.51
SHC1P29353 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.26■□□□□ 0.51
SHC1P29353 AC087289.5-201ENST00000586076 3175 ntBASIC18.26■□□□□ 0.51
SHC1P29353 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SHC1P29353 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SHC1P29353 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SHC1P29353 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SHC1P29353 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
SHC1P29353 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SHC1P29353 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.26■□□□□ 0.51
SHC1P29353 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
SHC1P29353 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SHC1P29353 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
SHC1P29353 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.26■□□□□ 0.51
SHC1P29353 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.26■□□□□ 0.51
SHC1P29353 DENND3-207ENST00000518347 850 ntTSL 2 BASIC18.26■□□□□ 0.51
SHC1P29353 AC083880.1-201ENST00000608266 535 ntBASIC18.26■□□□□ 0.51
SHC1P29353 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms