Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
KRT3P12035 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
KRT3P12035 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC21.06■□□□□ 0.96
KRT3P12035 SLC29A4P1-201ENST00000398760 971 ntBASIC21.06■□□□□ 0.96
KRT3P12035 GUSBP6-202ENST00000438529 1198 ntBASIC21.06■□□□□ 0.96
KRT3P12035 TSPY6P-201ENST00000448518 926 ntBASIC21.06■□□□□ 0.96
KRT3P12035 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
KRT3P12035 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC21.06■□□□□ 0.96
KRT3P12035 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
KRT3P12035 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
KRT3P12035 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
KRT3P12035 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
KRT3P12035 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
KRT3P12035 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
KRT3P12035 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC21.05■□□□□ 0.96
KRT3P12035 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
KRT3P12035 KRT8P20-201ENST00000423953 1409 ntBASIC21.05■□□□□ 0.96
KRT3P12035 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
KRT3P12035 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
KRT3P12035 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
KRT3P12035 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
KRT3P12035 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
KRT3P12035 SERPINH1P1-201ENST00000419794 1249 ntBASIC21.05■□□□□ 0.96
KRT3P12035 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC21.05■□□□□ 0.96
KRT3P12035 AL031963.3-201ENST00000606441 850 ntBASIC21.05■□□□□ 0.96
KRT3P12035 GXYLT1P5-201ENST00000614548 1189 ntBASIC21.05■□□□□ 0.96
KRT3P12035 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC21.05■□□□□ 0.96
KRT3P12035 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
KRT3P12035 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
KRT3P12035 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC21.05■□□□□ 0.96
KRT3P12035 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
KRT3P12035 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
KRT3P12035 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
KRT3P12035 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
KRT3P12035 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
KRT3P12035 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC21.04■□□□□ 0.96
KRT3P12035 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
KRT3P12035 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
KRT3P12035 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
KRT3P12035 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.04■□□□□ 0.96
KRT3P12035 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
KRT3P12035 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
KRT3P12035 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC21.04■□□□□ 0.96
KRT3P12035 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC21.04■□□□□ 0.96
KRT3P12035 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
KRT3P12035 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC21.04■□□□□ 0.96
KRT3P12035 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
KRT3P12035 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
KRT3P12035 AFG3L1P-217ENST00000557444 2447 ntBASIC21.04■□□□□ 0.96
KRT3P12035 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
KRT3P12035 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
KRT3P12035 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
KRT3P12035 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
KRT3P12035 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
KRT3P12035 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
KRT3P12035 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
KRT3P12035 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC21.03■□□□□ 0.96
KRT3P12035 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
KRT3P12035 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
KRT3P12035 OR2A1-AS1-201ENST00000462305 773 ntBASIC21.03■□□□□ 0.96
KRT3P12035 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC21.03■□□□□ 0.96
KRT3P12035 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC21.03■□□□□ 0.96
KRT3P12035 AC090192.1-201ENST00000517740 490 ntBASIC21.03■□□□□ 0.96
KRT3P12035 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC21.03■□□□□ 0.96
KRT3P12035 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
KRT3P12035 AC092118.2-201ENST00000613495 667 ntBASIC21.03■□□□□ 0.96
KRT3P12035 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
KRT3P12035 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC21.03■□□□□ 0.96
KRT3P12035 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
KRT3P12035 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
KRT3P12035 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
KRT3P12035 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
KRT3P12035 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
KRT3P12035 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
KRT3P12035 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
KRT3P12035 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
KRT3P12035 HLA-G-202ENST00000376815 851 ntBASIC21.02■□□□□ 0.96
KRT3P12035 HLA-G-203ENST00000376818 1127 ntBASIC21.02■□□□□ 0.96
KRT3P12035 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
KRT3P12035 AC023632.3-201ENST00000521633 145 ntBASIC21.02■□□□□ 0.96
KRT3P12035 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
KRT3P12035 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
KRT3P12035 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
KRT3P12035 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC21.02■□□□□ 0.96
KRT3P12035 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC21.02■□□□□ 0.96
KRT3P12035 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC21.02■□□□□ 0.96
KRT3P12035 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC21.02■□□□□ 0.96
KRT3P12035 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC21.02■□□□□ 0.96
KRT3P12035 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
KRT3P12035 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
KRT3P12035 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
KRT3P12035 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
KRT3P12035 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
KRT3P12035 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
KRT3P12035 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
KRT3P12035 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
KRT3P12035 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC21.01■□□□□ 0.95
KRT3P12035 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC21.01■□□□□ 0.95
KRT3P12035 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC21.01■□□□□ 0.95
KRT3P12035 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms