Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.72■□□□□ 0.91
CD48P09326 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CD48P09326 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CD48P09326 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CD48P09326 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CD48P09326 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
CD48P09326 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CD48P09326 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
CD48P09326 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CD48P09326 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CD48P09326 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CD48P09326 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CD48P09326 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
CD48P09326 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.71■□□□□ 0.91
CD48P09326 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.71■□□□□ 0.91
CD48P09326 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CD48P09326 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CD48P09326 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CD48P09326 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CD48P09326 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.71■□□□□ 0.91
CD48P09326 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.71■□□□□ 0.91
CD48P09326 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.71■□□□□ 0.91
CD48P09326 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.71■□□□□ 0.91
CD48P09326 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CD48P09326 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.71■□□□□ 0.91
CD48P09326 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.71■□□□□ 0.91
CD48P09326 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.71■□□□□ 0.91
CD48P09326 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.71■□□□□ 0.91
CD48P09326 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CD48P09326 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CD48P09326 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.71■□□□□ 0.91
CD48P09326 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CD48P09326 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CD48P09326 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
CD48P09326 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CD48P09326 KRT8P20-201ENST00000423953 1409 ntBASIC20.7■□□□□ 0.9
CD48P09326 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.7■□□□□ 0.9
CD48P09326 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CD48P09326 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.7■□□□□ 0.9
CD48P09326 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CD48P09326 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
CD48P09326 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CD48P09326 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
CD48P09326 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
CD48P09326 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CD48P09326 GPX1P1-201ENST00000388829 606 ntBASIC20.7■□□□□ 0.9
CD48P09326 NCF1B-203ENST00000435988 1254 ntBASIC20.7■□□□□ 0.9
CD48P09326 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.7■□□□□ 0.9
CD48P09326 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.7■□□□□ 0.9
CD48P09326 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CD48P09326 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CD48P09326 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CD48P09326 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CD48P09326 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CD48P09326 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.7■□□□□ 0.9
CD48P09326 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CD48P09326 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CD48P09326 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
CD48P09326 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
CD48P09326 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CD48P09326 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CD48P09326 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CD48P09326 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
CD48P09326 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CD48P09326 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CD48P09326 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.69■□□□□ 0.9
CD48P09326 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CD48P09326 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CD48P09326 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CD48P09326 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CD48P09326 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
CD48P09326 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.69■□□□□ 0.9
CD48P09326 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.69■□□□□ 0.9
CD48P09326 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.69■□□□□ 0.9
CD48P09326 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
CD48P09326 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.69■□□□□ 0.9
CD48P09326 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CD48P09326 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.69■□□□□ 0.9
CD48P09326 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CD48P09326 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.69■□□□□ 0.9
CD48P09326 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CD48P09326 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CD48P09326 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.69■□□□□ 0.9
CD48P09326 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CD48P09326 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CD48P09326 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.68■□□□□ 0.9
CD48P09326 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CD48P09326 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
CD48P09326 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CD48P09326 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CD48P09326 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CD48P09326 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.68■□□□□ 0.9
CD48P09326 TMEM179-206ENST00000616017 1645 ntBASIC20.68■□□□□ 0.9
CD48P09326 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CD48P09326 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CD48P09326 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CD48P09326 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CD48P09326 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CD48P09326 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.68■□□□□ 0.9
CD48P09326 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms