Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.63■□□□□ 0.73
CAPN1P07384 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC19.63■□□□□ 0.73
CAPN1P07384 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC19.63■□□□□ 0.73
CAPN1P07384 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CAPN1P07384 AC083880.1-201ENST00000608266 535 ntBASIC19.63■□□□□ 0.73
CAPN1P07384 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
CAPN1P07384 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CAPN1P07384 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CAPN1P07384 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CAPN1P07384 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CAPN1P07384 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
CAPN1P07384 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CAPN1P07384 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.62■□□□□ 0.73
CAPN1P07384 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
CAPN1P07384 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CAPN1P07384 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CAPN1P07384 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.62■□□□□ 0.73
CAPN1P07384 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CAPN1P07384 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.62■□□□□ 0.73
CAPN1P07384 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC19.62■□□□□ 0.73
CAPN1P07384 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
CAPN1P07384 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.62■□□□□ 0.73
CAPN1P07384 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CAPN1P07384 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.62■□□□□ 0.73
CAPN1P07384 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CAPN1P07384 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
CAPN1P07384 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.62■□□□□ 0.73
CAPN1P07384 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.61■□□□□ 0.73
CAPN1P07384 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CAPN1P07384 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CAPN1P07384 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CAPN1P07384 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
CAPN1P07384 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC19.61■□□□□ 0.73
CAPN1P07384 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CAPN1P07384 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.61■□□□□ 0.73
CAPN1P07384 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC19.61■□□□□ 0.73
CAPN1P07384 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC19.61■□□□□ 0.73
CAPN1P07384 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CAPN1P07384 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CAPN1P07384 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.61■□□□□ 0.73
CAPN1P07384 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CAPN1P07384 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CAPN1P07384 DPP3P2-201ENST00000416030 1696 ntBASIC19.61■□□□□ 0.73
CAPN1P07384 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.61■□□□□ 0.73
CAPN1P07384 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CAPN1P07384 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CAPN1P07384 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CAPN1P07384 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.6■□□□□ 0.73
CAPN1P07384 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.6■□□□□ 0.73
CAPN1P07384 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.6■□□□□ 0.73
CAPN1P07384 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CAPN1P07384 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CAPN1P07384 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CAPN1P07384 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC19.6■□□□□ 0.73
CAPN1P07384 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC19.6■□□□□ 0.73
CAPN1P07384 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC19.6■□□□□ 0.73
CAPN1P07384 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CAPN1P07384 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CAPN1P07384 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
CAPN1P07384 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CAPN1P07384 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CAPN1P07384 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CAPN1P07384 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
CAPN1P07384 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.6■□□□□ 0.73
CAPN1P07384 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CAPN1P07384 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CAPN1P07384 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CAPN1P07384 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CAPN1P07384 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CAPN1P07384 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.59■□□□□ 0.73
CAPN1P07384 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CAPN1P07384 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.59■□□□□ 0.73
CAPN1P07384 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CAPN1P07384 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CAPN1P07384 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.59■□□□□ 0.73
CAPN1P07384 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CAPN1P07384 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CAPN1P07384 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CAPN1P07384 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CAPN1P07384 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CAPN1P07384 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.59■□□□□ 0.73
CAPN1P07384 RHEB-204ENST00000472642 900 ntTSL 3 BASIC19.59■□□□□ 0.73
CAPN1P07384 AC091874.3-201ENST00000512672 1195 ntBASIC19.59■□□□□ 0.73
CAPN1P07384 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC19.59■□□□□ 0.73
CAPN1P07384 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CAPN1P07384 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CAPN1P07384 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CAPN1P07384 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
CAPN1P07384 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CAPN1P07384 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
CAPN1P07384 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CAPN1P07384 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CAPN1P07384 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CAPN1P07384 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CAPN1P07384 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
CAPN1P07384 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CAPN1P07384 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.58■□□□□ 0.73
CAPN1P07384 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.58■□□□□ 0.73
CAPN1P07384 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.58■□□□□ 0.73
CAPN1P07384 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.58■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms