Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
APOBP04114 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
APOBP04114 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC12.57□□□□□ -0.4
APOBP04114 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC12.57□□□□□ -0.4
APOBP04114 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
APOBP04114 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC12.57□□□□□ -0.4
APOBP04114 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC12.57□□□□□ -0.4
APOBP04114 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
APOBP04114 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
APOBP04114 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
APOBP04114 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
APOBP04114 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
APOBP04114 MFAP1P1-201ENST00000442257 1255 ntBASIC12.57□□□□□ -0.4
APOBP04114 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC12.57□□□□□ -0.4
APOBP04114 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC12.57□□□□□ -0.4
APOBP04114 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC12.57□□□□□ -0.4
APOBP04114 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
APOBP04114 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
APOBP04114 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC12.57□□□□□ -0.4
APOBP04114 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC12.57□□□□□ -0.4
APOBP04114 GRAMD4P8-201ENST00000605465 1115 ntBASIC12.57□□□□□ -0.4
APOBP04114 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC12.57□□□□□ -0.4
APOBP04114 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC12.57□□□□□ -0.4
APOBP04114 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC12.57□□□□□ -0.4
APOBP04114 KRT8P10-201ENST00000450021 1447 ntBASIC12.56□□□□□ -0.4
APOBP04114 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC12.56□□□□□ -0.4
APOBP04114 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
APOBP04114 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
APOBP04114 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC12.56□□□□□ -0.4
APOBP04114 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC12.56□□□□□ -0.4
APOBP04114 COX11P1-201ENST00000489116 835 ntBASIC12.56□□□□□ -0.4
APOBP04114 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC12.56□□□□□ -0.4
APOBP04114 HYMAI.1-201ENST00000620949 238 ntBASIC12.56□□□□□ -0.4
APOBP04114 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
APOBP04114 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
APOBP04114 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
APOBP04114 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
APOBP04114 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
APOBP04114 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
APOBP04114 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
APOBP04114 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
APOBP04114 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
APOBP04114 AC011506.1-201ENST00000474329 610 ntBASIC12.56□□□□□ -0.4
APOBP04114 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC12.56□□□□□ -0.4
APOBP04114 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC12.56□□□□□ -0.4
APOBP04114 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
APOBP04114 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
APOBP04114 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
APOBP04114 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
APOBP04114 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC12.56□□□□□ -0.4
APOBP04114 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC12.56□□□□□ -0.4
APOBP04114 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC12.56□□□□□ -0.4
APOBP04114 TSPY5P-201ENST00000426936 936 ntBASIC12.56□□□□□ -0.4
APOBP04114 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
APOBP04114 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC12.55□□□□□ -0.4
APOBP04114 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
APOBP04114 AL845331.1-201ENST00000424978 1190 ntBASIC12.55□□□□□ -0.4
APOBP04114 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
APOBP04114 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC12.55□□□□□ -0.4
APOBP04114 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
APOBP04114 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC12.55□□□□□ -0.4
APOBP04114 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
APOBP04114 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC12.55□□□□□ -0.4
APOBP04114 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC12.55□□□□□ -0.4
APOBP04114 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
APOBP04114 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
APOBP04114 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
APOBP04114 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
APOBP04114 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
APOBP04114 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
APOBP04114 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
APOBP04114 RNF152P1-201ENST00000397754 604 ntBASIC12.55□□□□□ -0.4
APOBP04114 TSPY21P-201ENST00000433481 731 ntBASIC12.55□□□□□ -0.4
APOBP04114 TSPY23P-201ENST00000440136 739 ntBASIC12.55□□□□□ -0.4
APOBP04114 KSR1P1-201ENST00000446298 240 ntBASIC12.55□□□□□ -0.4
APOBP04114 C1QL1P1-201ENST00000568105 661 ntBASIC12.55□□□□□ -0.4
APOBP04114 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC12.55□□□□□ -0.4
APOBP04114 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
APOBP04114 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
APOBP04114 HMGA1P5-201ENST00000412453 271 ntBASIC12.55□□□□□ -0.4
APOBP04114 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC12.55□□□□□ -0.4
APOBP04114 AC128688.1-201ENST00000487626 519 ntBASIC12.55□□□□□ -0.4
APOBP04114 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC12.55□□□□□ -0.4
APOBP04114 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
APOBP04114 AC096733.2-201ENST00000609937 1394 ntBASIC12.55□□□□□ -0.4
APOBP04114 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC12.54□□□□□ -0.4
APOBP04114 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
APOBP04114 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC12.54□□□□□ -0.4
APOBP04114 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC12.54□□□□□ -0.4
APOBP04114 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC12.54□□□□□ -0.4
APOBP04114 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC12.54□□□□□ -0.4
APOBP04114 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
APOBP04114 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
APOBP04114 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
APOBP04114 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
APOBP04114 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
APOBP04114 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
APOBP04114 AC097488.1-201ENST00000507834 756 ntBASIC12.54□□□□□ -0.4
APOBP04114 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
APOBP04114 AC083849.1-201ENST00000615227 514 ntBASIC12.54□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms