Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC24.2■■□□□ 1.47
COL1A1P02452 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC24.2■■□□□ 1.47
COL1A1P02452 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.47
COL1A1P02452 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC24.2■■□□□ 1.46
COL1A1P02452 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC24.2■■□□□ 1.46
COL1A1P02452 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
COL1A1P02452 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
COL1A1P02452 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
COL1A1P02452 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
COL1A1P02452 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC24.19■■□□□ 1.46
COL1A1P02452 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC24.19■■□□□ 1.46
COL1A1P02452 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC24.19■■□□□ 1.46
COL1A1P02452 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC24.19■■□□□ 1.46
COL1A1P02452 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC24.19■■□□□ 1.46
COL1A1P02452 CD177P1-201ENST00000606252 935 ntBASIC24.19■■□□□ 1.46
COL1A1P02452 AC026471.5-201ENST00000615068 467 ntBASIC24.19■■□□□ 1.46
COL1A1P02452 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC24.19■■□□□ 1.46
COL1A1P02452 KRT8P17-201ENST00000453110 1448 ntBASIC24.19■■□□□ 1.46
COL1A1P02452 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
COL1A1P02452 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC24.19■■□□□ 1.46
COL1A1P02452 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC24.19■■□□□ 1.46
COL1A1P02452 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
COL1A1P02452 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
COL1A1P02452 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC24.19■■□□□ 1.46
COL1A1P02452 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC24.19■■□□□ 1.46
COL1A1P02452 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC24.19■■□□□ 1.46
COL1A1P02452 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC24.19■■□□□ 1.46
COL1A1P02452 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
COL1A1P02452 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
COL1A1P02452 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
COL1A1P02452 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
COL1A1P02452 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
COL1A1P02452 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
COL1A1P02452 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
COL1A1P02452 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
COL1A1P02452 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC24.18■■□□□ 1.46
COL1A1P02452 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
COL1A1P02452 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
COL1A1P02452 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
COL1A1P02452 AL353807.1-201ENST00000427475 662 ntBASIC24.18■■□□□ 1.46
COL1A1P02452 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC24.18■■□□□ 1.46
COL1A1P02452 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC24.18■■□□□ 1.46
COL1A1P02452 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
COL1A1P02452 AL353708.3-201ENST00000610272 989 ntBASIC24.18■■□□□ 1.46
COL1A1P02452 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC24.18■■□□□ 1.46
COL1A1P02452 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC24.18■■□□□ 1.46
COL1A1P02452 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
COL1A1P02452 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC24.18■■□□□ 1.46
COL1A1P02452 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
COL1A1P02452 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC24.17■■□□□ 1.46
COL1A1P02452 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
COL1A1P02452 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
COL1A1P02452 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
COL1A1P02452 HLA-G-202ENST00000376815 851 ntBASIC24.17■■□□□ 1.46
COL1A1P02452 HLA-G-203ENST00000376818 1127 ntBASIC24.17■■□□□ 1.46
COL1A1P02452 KRT16P5-201ENST00000455284 522 ntBASIC24.17■■□□□ 1.46
COL1A1P02452 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC24.17■■□□□ 1.46
COL1A1P02452 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC24.17■■□□□ 1.46
COL1A1P02452 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC24.17■■□□□ 1.46
COL1A1P02452 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC24.17■■□□□ 1.46
COL1A1P02452 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
COL1A1P02452 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC24.17■■□□□ 1.46
COL1A1P02452 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC24.17■■□□□ 1.46
COL1A1P02452 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC24.17■■□□□ 1.46
COL1A1P02452 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC24.16■■□□□ 1.46
COL1A1P02452 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
COL1A1P02452 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC24.16■■□□□ 1.46
COL1A1P02452 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC24.16■■□□□ 1.46
COL1A1P02452 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC24.16■■□□□ 1.46
COL1A1P02452 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC24.16■■□□□ 1.46
COL1A1P02452 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC24.16■■□□□ 1.46
COL1A1P02452 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
COL1A1P02452 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC24.16■■□□□ 1.46
COL1A1P02452 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
COL1A1P02452 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
COL1A1P02452 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
COL1A1P02452 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC24.16■■□□□ 1.46
COL1A1P02452 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC24.16■■□□□ 1.46
COL1A1P02452 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC24.16■■□□□ 1.46
COL1A1P02452 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC24.16■■□□□ 1.46
COL1A1P02452 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC24.16■■□□□ 1.46
COL1A1P02452 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
COL1A1P02452 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
COL1A1P02452 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC24.16■■□□□ 1.46
COL1A1P02452 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
COL1A1P02452 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
COL1A1P02452 HTR7P1-201ENST00000538670 1336 ntBASIC24.16■■□□□ 1.46
COL1A1P02452 AC092720.2-201ENST00000602388 1665 ntBASIC24.15■■□□□ 1.46
COL1A1P02452 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC24.15■■□□□ 1.46
COL1A1P02452 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC24.15■■□□□ 1.46
COL1A1P02452 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
COL1A1P02452 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC24.15■■□□□ 1.46
COL1A1P02452 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
COL1A1P02452 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC24.15■■□□□ 1.46
COL1A1P02452 AF186192.3-201ENST00000583427 947 ntBASIC24.15■■□□□ 1.46
COL1A1P02452 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC24.15■■□□□ 1.46
COL1A1P02452 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
COL1A1P02452 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
COL1A1P02452 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC24.15■■□□□ 1.46
COL1A1P02452 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms