Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLPTM1O96005 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
CLPTM1O96005 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLPTM1O96005 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.8■□□□□ 0.6
CLPTM1O96005 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLPTM1O96005 TSPY26P-201ENST00000476365 1326 ntBASIC18.8■□□□□ 0.6
CLPTM1O96005 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLPTM1O96005 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLPTM1O96005 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.8■□□□□ 0.6
CLPTM1O96005 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
CLPTM1O96005 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CLPTM1O96005 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
CLPTM1O96005 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLPTM1O96005 GUK1-205ENST00000366722 850 ntTSL 3 BASIC18.8■□□□□ 0.6
CLPTM1O96005 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC18.8■□□□□ 0.6
CLPTM1O96005 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CLPTM1O96005 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLPTM1O96005 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CLPTM1O96005 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLPTM1O96005 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CLPTM1O96005 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLPTM1O96005 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
CLPTM1O96005 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC18.8■□□□□ 0.6
CLPTM1O96005 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLPTM1O96005 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLPTM1O96005 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.79■□□□□ 0.6
CLPTM1O96005 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.79■□□□□ 0.6
CLPTM1O96005 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLPTM1O96005 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.79■□□□□ 0.6
CLPTM1O96005 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC18.79■□□□□ 0.6
CLPTM1O96005 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC18.79■□□□□ 0.6
CLPTM1O96005 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC18.79■□□□□ 0.6
CLPTM1O96005 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC18.79■□□□□ 0.6
CLPTM1O96005 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLPTM1O96005 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLPTM1O96005 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.79■□□□□ 0.6
CLPTM1O96005 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLPTM1O96005 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CLPTM1O96005 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.79■□□□□ 0.6
CLPTM1O96005 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CLPTM1O96005 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLPTM1O96005 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLPTM1O96005 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLPTM1O96005 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CLPTM1O96005 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CLPTM1O96005 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CLPTM1O96005 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLPTM1O96005 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CLPTM1O96005 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CLPTM1O96005 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.78■□□□□ 0.6
CLPTM1O96005 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CLPTM1O96005 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.78■□□□□ 0.6
CLPTM1O96005 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLPTM1O96005 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CLPTM1O96005 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
CLPTM1O96005 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.78■□□□□ 0.6
CLPTM1O96005 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CLPTM1O96005 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CLPTM1O96005 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC18.78■□□□□ 0.6
CLPTM1O96005 RBM38-205ENST00000440234 686 ntTSL 2 BASIC18.78■□□□□ 0.6
CLPTM1O96005 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC18.78■□□□□ 0.6
CLPTM1O96005 IGHV3-19-201ENST00000521488 291 ntBASIC18.78■□□□□ 0.6
CLPTM1O96005 AP005435.1-201ENST00000529293 1178 ntBASIC18.78■□□□□ 0.6
CLPTM1O96005 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC18.78■□□□□ 0.6
CLPTM1O96005 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC18.78■□□□□ 0.6
CLPTM1O96005 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.78■□□□□ 0.6
CLPTM1O96005 AC092720.2-201ENST00000602388 1665 ntBASIC18.78■□□□□ 0.6
CLPTM1O96005 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLPTM1O96005 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLPTM1O96005 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CLPTM1O96005 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLPTM1O96005 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.78■□□□□ 0.6
CLPTM1O96005 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
CLPTM1O96005 AC079598.2-202ENST00000546624 1451 ntBASIC18.77■□□□□ 0.6
CLPTM1O96005 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CLPTM1O96005 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLPTM1O96005 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLPTM1O96005 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC18.77■□□□□ 0.6
CLPTM1O96005 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
CLPTM1O96005 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CLPTM1O96005 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLPTM1O96005 AL034346.1-201ENST00000568244 1277 ntBASIC18.77■□□□□ 0.6
CLPTM1O96005 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CLPTM1O96005 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CLPTM1O96005 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CLPTM1O96005 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CLPTM1O96005 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
CLPTM1O96005 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.77■□□□□ 0.6
CLPTM1O96005 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.77■□□□□ 0.6
CLPTM1O96005 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.77■□□□□ 0.6
CLPTM1O96005 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.77■□□□□ 0.6
CLPTM1O96005 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.77■□□□□ 0.6
CLPTM1O96005 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
CLPTM1O96005 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
CLPTM1O96005 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CLPTM1O96005 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLPTM1O96005 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLPTM1O96005 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CLPTM1O96005 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLPTM1O96005 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms