Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CSPG5O95196 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.48■■□□□ 1.03
CSPG5O95196 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CSPG5O95196 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CSPG5O95196 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
CSPG5O95196 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC21.48■■□□□ 1.03
CSPG5O95196 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CSPG5O95196 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CSPG5O95196 ECEL1P1-201ENST00000373592 1742 ntBASIC21.48■■□□□ 1.03
CSPG5O95196 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CSPG5O95196 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.48■■□□□ 1.03
CSPG5O95196 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CSPG5O95196 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
CSPG5O95196 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CSPG5O95196 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
CSPG5O95196 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CSPG5O95196 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CSPG5O95196 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.47■■□□□ 1.03
CSPG5O95196 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CSPG5O95196 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC21.47■■□□□ 1.03
CSPG5O95196 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CSPG5O95196 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC21.47■■□□□ 1.03
CSPG5O95196 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC21.47■■□□□ 1.03
CSPG5O95196 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CSPG5O95196 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC21.47■■□□□ 1.03
CSPG5O95196 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CSPG5O95196 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CSPG5O95196 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CSPG5O95196 SRI-203ENST00000419179 1307 ntTSL 2 BASIC21.47■■□□□ 1.03
CSPG5O95196 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CSPG5O95196 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CSPG5O95196 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CSPG5O95196 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC21.46■■□□□ 1.03
CSPG5O95196 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.46■■□□□ 1.03
CSPG5O95196 AC242852.2-201ENST00000615738 1807 ntBASIC21.46■■□□□ 1.03
CSPG5O95196 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
CSPG5O95196 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
CSPG5O95196 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CSPG5O95196 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC21.46■■□□□ 1.03
CSPG5O95196 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CSPG5O95196 AP002982.1-201ENST00000492365 877 ntBASIC21.46■■□□□ 1.03
CSPG5O95196 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC21.46■■□□□ 1.03
CSPG5O95196 REXO1L10P-201ENST00000615707 1290 ntBASIC21.46■■□□□ 1.03
CSPG5O95196 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CSPG5O95196 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CSPG5O95196 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CSPG5O95196 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CSPG5O95196 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CSPG5O95196 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CSPG5O95196 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
CSPG5O95196 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
CSPG5O95196 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CSPG5O95196 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CSPG5O95196 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC21.45■■□□□ 1.02
CSPG5O95196 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
CSPG5O95196 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC21.45■■□□□ 1.02
CSPG5O95196 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC21.45■■□□□ 1.02
CSPG5O95196 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC21.45■■□□□ 1.02
CSPG5O95196 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC21.45■■□□□ 1.02
CSPG5O95196 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC21.45■■□□□ 1.02
CSPG5O95196 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC21.45■■□□□ 1.02
CSPG5O95196 AL121829.2-201ENST00000620908 328 ntBASIC21.45■■□□□ 1.02
CSPG5O95196 AC092865.7-201ENST00000641832 219 ntBASIC21.45■■□□□ 1.02
CSPG5O95196 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC21.45■■□□□ 1.02
CSPG5O95196 LINC01568-207ENST00000641790 1380 ntBASIC21.45■■□□□ 1.02
CSPG5O95196 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CSPG5O95196 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CSPG5O95196 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CSPG5O95196 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CSPG5O95196 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CSPG5O95196 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
CSPG5O95196 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CSPG5O95196 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CSPG5O95196 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
CSPG5O95196 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC21.44■■□□□ 1.02
CSPG5O95196 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC21.44■■□□□ 1.02
CSPG5O95196 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC21.44■■□□□ 1.02
CSPG5O95196 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CSPG5O95196 AC145285.6-201ENST00000604632 637 ntBASIC21.44■■□□□ 1.02
CSPG5O95196 AL031963.3-201ENST00000606441 850 ntBASIC21.44■■□□□ 1.02
CSPG5O95196 AC073195.1-201ENST00000607241 877 ntBASIC21.44■■□□□ 1.02
CSPG5O95196 AL590326.2-201ENST00000625139 305 ntBASIC21.44■■□□□ 1.02
CSPG5O95196 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CSPG5O95196 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CSPG5O95196 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
CSPG5O95196 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CSPG5O95196 AL137060.1-201ENST00000618151 2648 ntBASIC21.43■■□□□ 1.02
CSPG5O95196 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CSPG5O95196 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.43■■□□□ 1.02
CSPG5O95196 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
CSPG5O95196 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CSPG5O95196 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CSPG5O95196 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC21.43■■□□□ 1.02
CSPG5O95196 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
CSPG5O95196 UNC93B2-201ENST00000285383 730 ntBASIC21.43■■□□□ 1.02
CSPG5O95196 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CSPG5O95196 AL353807.1-201ENST00000427475 662 ntBASIC21.43■■□□□ 1.02
CSPG5O95196 RNF146-204ENST00000476956 884 ntTSL 2 BASIC21.43■■□□□ 1.02
CSPG5O95196 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
CSPG5O95196 RMI2-205ENST00000576027 818 ntTSL 2 BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms