Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 AC128676.1-201ENST00000454392 318 ntBASIC19.18■□□□□ 0.66
SNRNP200O75643 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
SNRNP200O75643 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.18■□□□□ 0.66
SNRNP200O75643 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SNRNP200O75643 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.18■□□□□ 0.66
SNRNP200O75643 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
SNRNP200O75643 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.18■□□□□ 0.66
SNRNP200O75643 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.17■□□□□ 0.66
SNRNP200O75643 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SNRNP200O75643 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.17■□□□□ 0.66
SNRNP200O75643 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SNRNP200O75643 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
SNRNP200O75643 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SNRNP200O75643 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SNRNP200O75643 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.17■□□□□ 0.66
SNRNP200O75643 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19.17■□□□□ 0.66
SNRNP200O75643 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SNRNP200O75643 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
SNRNP200O75643 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SNRNP200O75643 KRT8P20-201ENST00000423953 1409 ntBASIC19.17■□□□□ 0.66
SNRNP200O75643 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SNRNP200O75643 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SNRNP200O75643 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SNRNP200O75643 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SNRNP200O75643 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SNRNP200O75643 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
SNRNP200O75643 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
SNRNP200O75643 TMEM191A-211ENST00000637163 1067 ntBASIC19.17■□□□□ 0.66
SNRNP200O75643 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SNRNP200O75643 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.17■□□□□ 0.66
SNRNP200O75643 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
SNRNP200O75643 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.17■□□□□ 0.66
SNRNP200O75643 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
SNRNP200O75643 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.17■□□□□ 0.66
SNRNP200O75643 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
SNRNP200O75643 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC19.16■□□□□ 0.66
SNRNP200O75643 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC19.16■□□□□ 0.66
SNRNP200O75643 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SNRNP200O75643 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SNRNP200O75643 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.16■□□□□ 0.66
SNRNP200O75643 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.16■□□□□ 0.66
SNRNP200O75643 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SNRNP200O75643 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SNRNP200O75643 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SNRNP200O75643 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SNRNP200O75643 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SNRNP200O75643 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.16■□□□□ 0.66
SNRNP200O75643 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.16■□□□□ 0.66
SNRNP200O75643 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC19.16■□□□□ 0.66
SNRNP200O75643 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
SNRNP200O75643 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.16■□□□□ 0.66
SNRNP200O75643 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SNRNP200O75643 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SNRNP200O75643 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SNRNP200O75643 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
SNRNP200O75643 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SNRNP200O75643 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.15■□□□□ 0.66
SNRNP200O75643 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.15■□□□□ 0.66
SNRNP200O75643 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
SNRNP200O75643 RHOD-202ENST00000532559 538 ntTSL 3 BASIC19.15■□□□□ 0.66
SNRNP200O75643 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC19.15■□□□□ 0.66
SNRNP200O75643 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.15■□□□□ 0.66
SNRNP200O75643 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SNRNP200O75643 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SNRNP200O75643 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SNRNP200O75643 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SNRNP200O75643 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
SNRNP200O75643 LINC01521-201ENST00000504184 1943 ntBASIC19.15■□□□□ 0.66
SNRNP200O75643 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC19.15■□□□□ 0.66
SNRNP200O75643 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SNRNP200O75643 AL158047.1-201ENST00000445918 881 ntBASIC19.15■□□□□ 0.66
SNRNP200O75643 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.15■□□□□ 0.66
SNRNP200O75643 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.15■□□□□ 0.66
SNRNP200O75643 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.14■□□□□ 0.66
SNRNP200O75643 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.14■□□□□ 0.66
SNRNP200O75643 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SNRNP200O75643 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SNRNP200O75643 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.14■□□□□ 0.65
SNRNP200O75643 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.14■□□□□ 0.65
SNRNP200O75643 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.65
SNRNP200O75643 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
SNRNP200O75643 AL390719.1-204ENST00000412397 1219 ntBASIC19.14■□□□□ 0.65
SNRNP200O75643 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC19.14■□□□□ 0.65
SNRNP200O75643 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC19.14■□□□□ 0.65
SNRNP200O75643 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC19.14■□□□□ 0.65
SNRNP200O75643 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.14■□□□□ 0.65
SNRNP200O75643 AC124016.1-201ENST00000609552 612 ntBASIC19.14■□□□□ 0.65
SNRNP200O75643 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
SNRNP200O75643 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.14■□□□□ 0.65
SNRNP200O75643 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SNRNP200O75643 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.14■□□□□ 0.65
SNRNP200O75643 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SNRNP200O75643 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SNRNP200O75643 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SNRNP200O75643 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
SNRNP200O75643 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.14■□□□□ 0.65
SNRNP200O75643 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SNRNP200O75643 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SNRNP200O75643 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.13■□□□□ 0.65
SNRNP200O75643 USP36-216ENST00000589424 970 ntTSL 5 BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms