Protein–RNA interactions for Protein: O75473

LGR5, Leucine-rich repeat-containing G-protein coupled receptor 5, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5O75473 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC22.28■■□□□ 1.16
LGR5O75473 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC22.28■■□□□ 1.16
LGR5O75473 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC22.28■■□□□ 1.16
LGR5O75473 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
LGR5O75473 MIR4785-201ENST00000585005 73 ntBASIC22.28■■□□□ 1.16
LGR5O75473 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
LGR5O75473 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC22.28■■□□□ 1.16
LGR5O75473 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
LGR5O75473 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
LGR5O75473 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC22.28■■□□□ 1.16
LGR5O75473 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
LGR5O75473 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC22.28■■□□□ 1.16
LGR5O75473 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
LGR5O75473 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
LGR5O75473 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
LGR5O75473 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC22.27■■□□□ 1.16
LGR5O75473 AC092720.2-201ENST00000602388 1665 ntBASIC22.27■■□□□ 1.16
LGR5O75473 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC22.27■■□□□ 1.16
LGR5O75473 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
LGR5O75473 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
LGR5O75473 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
LGR5O75473 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
LGR5O75473 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
LGR5O75473 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
LGR5O75473 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC22.27■■□□□ 1.16
LGR5O75473 KRT16P5-201ENST00000455284 522 ntBASIC22.27■■□□□ 1.16
LGR5O75473 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC22.27■■□□□ 1.16
LGR5O75473 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC22.27■■□□□ 1.16
LGR5O75473 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC22.27■■□□□ 1.16
LGR5O75473 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC22.27■■□□□ 1.16
LGR5O75473 AC113410.3-201ENST00000623366 203 ntBASIC22.27■■□□□ 1.16
LGR5O75473 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
LGR5O75473 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC22.27■■□□□ 1.16
LGR5O75473 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC22.27■■□□□ 1.16
LGR5O75473 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC22.27■■□□□ 1.16
LGR5O75473 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC22.26■■□□□ 1.15
LGR5O75473 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
LGR5O75473 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
LGR5O75473 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
LGR5O75473 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
LGR5O75473 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
LGR5O75473 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC22.26■■□□□ 1.15
LGR5O75473 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC22.26■■□□□ 1.15
LGR5O75473 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC22.26■■□□□ 1.15
LGR5O75473 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
LGR5O75473 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
LGR5O75473 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
LGR5O75473 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
LGR5O75473 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
LGR5O75473 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC22.25■■□□□ 1.15
LGR5O75473 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC22.25■■□□□ 1.15
LGR5O75473 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC22.25■■□□□ 1.15
LGR5O75473 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC22.25■■□□□ 1.15
LGR5O75473 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
LGR5O75473 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC22.25■■□□□ 1.15
LGR5O75473 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
LGR5O75473 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
LGR5O75473 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC22.24■■□□□ 1.15
LGR5O75473 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
LGR5O75473 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
LGR5O75473 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
LGR5O75473 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
LGR5O75473 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC22.24■■□□□ 1.15
LGR5O75473 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
LGR5O75473 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
LGR5O75473 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
LGR5O75473 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
LGR5O75473 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
LGR5O75473 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
LGR5O75473 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
LGR5O75473 KRT18P21-201ENST00000515767 1272 ntBASIC22.24■■□□□ 1.15
LGR5O75473 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC22.24■■□□□ 1.15
LGR5O75473 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC22.24■■□□□ 1.15
LGR5O75473 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC22.24■■□□□ 1.15
LGR5O75473 AC010331.1-201ENST00000611423 582 ntBASIC22.24■■□□□ 1.15
LGR5O75473 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
LGR5O75473 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
LGR5O75473 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
LGR5O75473 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
LGR5O75473 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
LGR5O75473 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC22.24■■□□□ 1.15
LGR5O75473 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
LGR5O75473 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC22.23■■□□□ 1.15
LGR5O75473 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC22.23■■□□□ 1.15
LGR5O75473 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
LGR5O75473 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
LGR5O75473 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
LGR5O75473 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC22.23■■□□□ 1.15
LGR5O75473 TSPY15P-201ENST00000457163 923 ntBASIC22.23■■□□□ 1.15
LGR5O75473 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC22.23■■□□□ 1.15
LGR5O75473 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC22.23■■□□□ 1.15
LGR5O75473 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC22.23■■□□□ 1.15
LGR5O75473 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC22.23■■□□□ 1.15
LGR5O75473 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC22.23■■□□□ 1.15
LGR5O75473 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
LGR5O75473 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC22.23■■□□□ 1.15
LGR5O75473 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC22.23■■□□□ 1.15
LGR5O75473 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC22.22■■□□□ 1.15
LGR5O75473 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
LGR5O75473 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC22.22■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms