Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TRIM3O75382 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.58■□□□□ 0.56
TRIM3O75382 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.58■□□□□ 0.56
TRIM3O75382 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.57■□□□□ 0.56
TRIM3O75382 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM3O75382 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM3O75382 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM3O75382 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.57■□□□□ 0.56
TRIM3O75382 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.57■□□□□ 0.56
TRIM3O75382 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
TRIM3O75382 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.57■□□□□ 0.56
TRIM3O75382 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
TRIM3O75382 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC18.57■□□□□ 0.56
TRIM3O75382 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC18.57■□□□□ 0.56
TRIM3O75382 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.57■□□□□ 0.56
TRIM3O75382 MIR2861-201ENST00000636310 90 ntBASIC18.57■□□□□ 0.56
TRIM3O75382 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM3O75382 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
TRIM3O75382 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
TRIM3O75382 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM3O75382 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
TRIM3O75382 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM3O75382 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM3O75382 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
TRIM3O75382 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM3O75382 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM3O75382 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.56■□□□□ 0.56
TRIM3O75382 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.56■□□□□ 0.56
TRIM3O75382 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM3O75382 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM3O75382 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM3O75382 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM3O75382 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM3O75382 ABHD17AP1-201ENST00000358206 933 ntBASIC18.56■□□□□ 0.56
TRIM3O75382 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM3O75382 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18.56■□□□□ 0.56
TRIM3O75382 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.56■□□□□ 0.56
TRIM3O75382 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM3O75382 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.56■□□□□ 0.56
TRIM3O75382 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.56■□□□□ 0.56
TRIM3O75382 C2orf69P4-201ENST00000565394 541 ntBASIC18.56■□□□□ 0.56
TRIM3O75382 MIR4651-201ENST00000582622 73 ntBASIC18.56■□□□□ 0.56
TRIM3O75382 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.56■□□□□ 0.56
TRIM3O75382 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
TRIM3O75382 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM3O75382 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.56■□□□□ 0.56
TRIM3O75382 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM3O75382 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM3O75382 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
TRIM3O75382 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM3O75382 FEM1AP1-201ENST00000431297 1995 ntBASIC18.55■□□□□ 0.56
TRIM3O75382 PLK5-205ENST00000642079 1969 ntBASIC18.55■□□□□ 0.56
TRIM3O75382 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.55■□□□□ 0.56
TRIM3O75382 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM3O75382 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM3O75382 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM3O75382 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.55■□□□□ 0.56
TRIM3O75382 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM3O75382 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
TRIM3O75382 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM3O75382 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM3O75382 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM3O75382 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.55■□□□□ 0.56
TRIM3O75382 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.55■□□□□ 0.56
TRIM3O75382 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
TRIM3O75382 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.55■□□□□ 0.56
TRIM3O75382 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
TRIM3O75382 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.55■□□□□ 0.56
TRIM3O75382 HLA-B-256ENST00000639848 1089 ntBASIC18.55■□□□□ 0.56
TRIM3O75382 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM3O75382 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
TRIM3O75382 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM3O75382 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
TRIM3O75382 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM3O75382 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
TRIM3O75382 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM3O75382 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.54■□□□□ 0.56
TRIM3O75382 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM3O75382 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
TRIM3O75382 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
TRIM3O75382 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM3O75382 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM3O75382 TSPY20P-201ENST00000450910 630 ntBASIC18.54■□□□□ 0.56
TRIM3O75382 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
TRIM3O75382 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.54■□□□□ 0.56
TRIM3O75382 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
TRIM3O75382 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM3O75382 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM3O75382 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM3O75382 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
TRIM3O75382 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
TRIM3O75382 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM3O75382 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.54■□□□□ 0.56
TRIM3O75382 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.54■□□□□ 0.56
TRIM3O75382 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM3O75382 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM3O75382 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM3O75382 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.53■□□□□ 0.56
TRIM3O75382 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM3O75382 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms