Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRAF3IP2O43734 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRAF3IP2O43734 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC17.83■□□□□ 0.44
TRAF3IP2O43734 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TRAF3IP2O43734 CD37-204ENST00000535669 1674 ntTSL 2 BASIC17.83■□□□□ 0.44
TRAF3IP2O43734 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRAF3IP2O43734 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC17.83■□□□□ 0.44
TRAF3IP2O43734 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRAF3IP2O43734 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
TRAF3IP2O43734 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC17.83■□□□□ 0.44
TRAF3IP2O43734 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TRAF3IP2O43734 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC17.83■□□□□ 0.44
TRAF3IP2O43734 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAF3IP2O43734 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
TRAF3IP2O43734 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAF3IP2O43734 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAF3IP2O43734 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRAF3IP2O43734 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC17.82■□□□□ 0.44
TRAF3IP2O43734 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAF3IP2O43734 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
TRAF3IP2O43734 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC17.82■□□□□ 0.44
TRAF3IP2O43734 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAF3IP2O43734 HLA-L-209ENST00000420110 1011 ntBASIC17.82■□□□□ 0.44
TRAF3IP2O43734 AC073210.2-201ENST00000430369 194 ntBASIC17.82■□□□□ 0.44
TRAF3IP2O43734 RHEB-204ENST00000472642 900 ntTSL 3 BASIC17.82■□□□□ 0.44
TRAF3IP2O43734 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC17.82■□□□□ 0.44
TRAF3IP2O43734 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC17.82■□□□□ 0.44
TRAF3IP2O43734 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
TRAF3IP2O43734 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC17.82■□□□□ 0.44
TRAF3IP2O43734 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAF3IP2O43734 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC17.82■□□□□ 0.44
TRAF3IP2O43734 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.82■□□□□ 0.44
TRAF3IP2O43734 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
TRAF3IP2O43734 PCDHAC2-203ENST00000615316 3011 ntBASIC17.82■□□□□ 0.44
TRAF3IP2O43734 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAF3IP2O43734 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAF3IP2O43734 ME2-218ENST00000640965 2476 ntTSL 5 BASIC17.81■□□□□ 0.44
TRAF3IP2O43734 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRAF3IP2O43734 CRK-204ENST00000574295 1391 ntTSL 5 BASIC17.81■□□□□ 0.44
TRAF3IP2O43734 AL691432.2-201ENST00000607222 2038 ntBASIC17.81■□□□□ 0.44
TRAF3IP2O43734 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAF3IP2O43734 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAF3IP2O43734 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC17.81■□□□□ 0.44
TRAF3IP2O43734 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAF3IP2O43734 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAF3IP2O43734 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAF3IP2O43734 MFF-205ENST00000354503 1085 ntTSL 2 BASIC17.81■□□□□ 0.44
TRAF3IP2O43734 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAF3IP2O43734 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC17.81■□□□□ 0.44
TRAF3IP2O43734 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRAF3IP2O43734 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAF3IP2O43734 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC17.81■□□□□ 0.44
TRAF3IP2O43734 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAF3IP2O43734 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAF3IP2O43734 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRAF3IP2O43734 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
TRAF3IP2O43734 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAF3IP2O43734 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAF3IP2O43734 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRAF3IP2O43734 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAF3IP2O43734 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAF3IP2O43734 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC17.81■□□□□ 0.44
TRAF3IP2O43734 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAF3IP2O43734 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
TRAF3IP2O43734 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAF3IP2O43734 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAF3IP2O43734 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAF3IP2O43734 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAF3IP2O43734 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAF3IP2O43734 HLA-G-202ENST00000376815 851 ntBASIC17.8■□□□□ 0.44
TRAF3IP2O43734 HLA-G-203ENST00000376818 1127 ntBASIC17.8■□□□□ 0.44
TRAF3IP2O43734 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC17.8■□□□□ 0.44
TRAF3IP2O43734 AC069152.1-201ENST00000438030 544 ntBASIC17.8■□□□□ 0.44
TRAF3IP2O43734 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC17.8■□□□□ 0.44
TRAF3IP2O43734 AC083880.1-201ENST00000608266 535 ntBASIC17.8■□□□□ 0.44
TRAF3IP2O43734 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAF3IP2O43734 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC17.8■□□□□ 0.44
TRAF3IP2O43734 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAF3IP2O43734 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
TRAF3IP2O43734 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAF3IP2O43734 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAF3IP2O43734 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC17.8■□□□□ 0.44
TRAF3IP2O43734 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC17.8■□□□□ 0.44
TRAF3IP2O43734 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRAF3IP2O43734 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.8■□□□□ 0.44
TRAF3IP2O43734 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAF3IP2O43734 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRAF3IP2O43734 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAF3IP2O43734 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAF3IP2O43734 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAF3IP2O43734 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAF3IP2O43734 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAF3IP2O43734 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRAF3IP2O43734 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAF3IP2O43734 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRAF3IP2O43734 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAF3IP2O43734 ID1-201ENST00000376105 1233 ntBASIC17.79■□□□□ 0.44
TRAF3IP2O43734 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAF3IP2O43734 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRAF3IP2O43734 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms