Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
KDELR3O43731 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
KDELR3O43731 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
KDELR3O43731 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
KDELR3O43731 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
KDELR3O43731 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
KDELR3O43731 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
KDELR3O43731 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.31■□□□□ 0.84
KDELR3O43731 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.31■□□□□ 0.84
KDELR3O43731 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
KDELR3O43731 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC20.31■□□□□ 0.84
KDELR3O43731 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.31■□□□□ 0.84
KDELR3O43731 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
KDELR3O43731 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
KDELR3O43731 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
KDELR3O43731 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
KDELR3O43731 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
KDELR3O43731 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
KDELR3O43731 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.3■□□□□ 0.84
KDELR3O43731 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.3■□□□□ 0.84
KDELR3O43731 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
KDELR3O43731 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.3■□□□□ 0.84
KDELR3O43731 AC124283.5-201ENST00000624661 1809 ntBASIC20.3■□□□□ 0.84
KDELR3O43731 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KDELR3O43731 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KDELR3O43731 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.3■□□□□ 0.84
KDELR3O43731 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KDELR3O43731 KRT18P29-201ENST00000397031 1267 ntBASIC20.3■□□□□ 0.84
KDELR3O43731 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
KDELR3O43731 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
KDELR3O43731 AC069544.1-201ENST00000609399 999 ntBASIC20.3■□□□□ 0.84
KDELR3O43731 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC20.3■□□□□ 0.84
KDELR3O43731 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
KDELR3O43731 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
KDELR3O43731 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KDELR3O43731 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KDELR3O43731 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
KDELR3O43731 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
KDELR3O43731 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KDELR3O43731 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KDELR3O43731 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
KDELR3O43731 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
KDELR3O43731 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
KDELR3O43731 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.29■□□□□ 0.84
KDELR3O43731 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
KDELR3O43731 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.29■□□□□ 0.84
KDELR3O43731 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.29■□□□□ 0.84
KDELR3O43731 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
KDELR3O43731 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
KDELR3O43731 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
KDELR3O43731 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
KDELR3O43731 AC233263.1-201ENST00000578059 224 ntBASIC20.29■□□□□ 0.84
KDELR3O43731 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
KDELR3O43731 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
KDELR3O43731 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.29■□□□□ 0.84
KDELR3O43731 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
KDELR3O43731 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
KDELR3O43731 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
KDELR3O43731 AC099778.1-201ENST00000568593 1911 ntBASIC20.29■□□□□ 0.84
KDELR3O43731 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
KDELR3O43731 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
KDELR3O43731 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
KDELR3O43731 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
KDELR3O43731 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
KDELR3O43731 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
KDELR3O43731 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
KDELR3O43731 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
KDELR3O43731 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
KDELR3O43731 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
KDELR3O43731 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
KDELR3O43731 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
KDELR3O43731 IRX5-204ENST00000560154 879 ntTSL 5 BASIC20.28■□□□□ 0.84
KDELR3O43731 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.28■□□□□ 0.84
KDELR3O43731 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
KDELR3O43731 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
KDELR3O43731 AL121829.2-201ENST00000620908 328 ntBASIC20.28■□□□□ 0.84
KDELR3O43731 TMEM191A-211ENST00000637163 1067 ntBASIC20.28■□□□□ 0.84
KDELR3O43731 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
KDELR3O43731 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
KDELR3O43731 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
KDELR3O43731 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
KDELR3O43731 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
KDELR3O43731 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
KDELR3O43731 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.27■□□□□ 0.84
KDELR3O43731 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
KDELR3O43731 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
KDELR3O43731 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.27■□□□□ 0.84
KDELR3O43731 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
KDELR3O43731 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.27■□□□□ 0.84
KDELR3O43731 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
KDELR3O43731 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
KDELR3O43731 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.27■□□□□ 0.84
KDELR3O43731 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
KDELR3O43731 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
KDELR3O43731 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
KDELR3O43731 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
KDELR3O43731 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
KDELR3O43731 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20.27■□□□□ 0.84
KDELR3O43731 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
KDELR3O43731 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms