Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.17■□□□□ 0.5
RNF13O43567 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC18.17■□□□□ 0.5
RNF13O43567 AC008694.1-202ENST00000636953 945 ntBASIC18.17■□□□□ 0.5
RNF13O43567 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RNF13O43567 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
RNF13O43567 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
RNF13O43567 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.17■□□□□ 0.5
RNF13O43567 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RNF13O43567 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RNF13O43567 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
RNF13O43567 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RNF13O43567 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RNF13O43567 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.16■□□□□ 0.5
RNF13O43567 AL020996.1-203ENST00000536896 2307 ntBASIC18.16■□□□□ 0.5
RNF13O43567 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
RNF13O43567 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.16■□□□□ 0.5
RNF13O43567 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC18.16■□□□□ 0.5
RNF13O43567 PARL-206ENST00000435888 1098 ntTSL 5 BASIC18.16■□□□□ 0.5
RNF13O43567 AC069236.1-201ENST00000604339 616 ntBASIC18.16■□□□□ 0.5
RNF13O43567 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.16■□□□□ 0.5
RNF13O43567 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.16■□□□□ 0.5
RNF13O43567 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
RNF13O43567 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.16■□□□□ 0.5
RNF13O43567 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF13O43567 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.16■□□□□ 0.5
RNF13O43567 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF13O43567 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RNF13O43567 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.16■□□□□ 0.5
RNF13O43567 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF13O43567 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF13O43567 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.15■□□□□ 0.5
RNF13O43567 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF13O43567 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF13O43567 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF13O43567 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF13O43567 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF13O43567 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RNF13O43567 MCRIP2P1-201ENST00000394346 511 ntBASIC18.15■□□□□ 0.5
RNF13O43567 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RNF13O43567 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC18.15■□□□□ 0.5
RNF13O43567 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF13O43567 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18.15■□□□□ 0.5
RNF13O43567 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.15■□□□□ 0.5
RNF13O43567 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
RNF13O43567 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.15■□□□□ 0.5
RNF13O43567 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.15■□□□□ 0.5
RNF13O43567 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF13O43567 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF13O43567 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.15■□□□□ 0.5
RNF13O43567 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.15■□□□□ 0.5
RNF13O43567 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF13O43567 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF13O43567 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF13O43567 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
RNF13O43567 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.14■□□□□ 0.5
RNF13O43567 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.5
RNF13O43567 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
RNF13O43567 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
RNF13O43567 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF13O43567 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF13O43567 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF13O43567 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF13O43567 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.49
RNF13O43567 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF13O43567 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF13O43567 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF13O43567 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RNF13O43567 METTL26-203ENST00000397664 604 ntTSL 2 BASIC18.14■□□□□ 0.49
RNF13O43567 CYP2T1P-201ENST00000432607 1285 ntBASIC18.14■□□□□ 0.49
RNF13O43567 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RNF13O43567 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
RNF13O43567 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF13O43567 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.14■□□□□ 0.49
RNF13O43567 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
RNF13O43567 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.14■□□□□ 0.49
RNF13O43567 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF13O43567 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.14■□□□□ 0.49
RNF13O43567 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.14■□□□□ 0.49
RNF13O43567 AC116562.4-201ENST00000641316 2276 ntBASIC18.14■□□□□ 0.49
RNF13O43567 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.14■□□□□ 0.49
RNF13O43567 AC018445.3-201ENST00000624177 1945 ntBASIC18.13■□□□□ 0.49
RNF13O43567 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.13■□□□□ 0.49
RNF13O43567 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF13O43567 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RNF13O43567 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.13■□□□□ 0.49
RNF13O43567 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF13O43567 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
RNF13O43567 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF13O43567 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.13■□□□□ 0.49
RNF13O43567 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
RNF13O43567 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RNF13O43567 AC100791.3-201ENST00000617619 330 ntBASIC18.13■□□□□ 0.49
RNF13O43567 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC18.13■□□□□ 0.49
RNF13O43567 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF13O43567 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
RNF13O43567 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC18.13■□□□□ 0.49
RNF13O43567 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.13■□□□□ 0.49
RNF13O43567 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RNF13O43567 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF13O43567 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms