Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.96■□□□□ 0.63
PROM1O43490 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.96■□□□□ 0.63
PROM1O43490 AC142086.2-201ENST00000569753 217 ntBASIC18.96■□□□□ 0.63
PROM1O43490 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PROM1O43490 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.96■□□□□ 0.63
PROM1O43490 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
PROM1O43490 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC18.96■□□□□ 0.63
PROM1O43490 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.96■□□□□ 0.63
PROM1O43490 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
PROM1O43490 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PROM1O43490 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PROM1O43490 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PROM1O43490 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PROM1O43490 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PROM1O43490 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
PROM1O43490 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PROM1O43490 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PROM1O43490 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
PROM1O43490 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
PROM1O43490 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.95■□□□□ 0.62
PROM1O43490 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
PROM1O43490 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PROM1O43490 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.95■□□□□ 0.62
PROM1O43490 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.95■□□□□ 0.62
PROM1O43490 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PROM1O43490 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
PROM1O43490 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PROM1O43490 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PROM1O43490 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.95■□□□□ 0.62
PROM1O43490 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.95■□□□□ 0.62
PROM1O43490 AC097658.1-201ENST00000475555 843 ntBASIC18.95■□□□□ 0.62
PROM1O43490 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PROM1O43490 AC023632.3-201ENST00000521633 145 ntBASIC18.95■□□□□ 0.62
PROM1O43490 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PROM1O43490 MYC-209ENST00000641252 345 ntBASIC18.95■□□□□ 0.62
PROM1O43490 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.95■□□□□ 0.62
PROM1O43490 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PROM1O43490 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PROM1O43490 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PROM1O43490 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.95■□□□□ 0.62
PROM1O43490 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.95■□□□□ 0.62
PROM1O43490 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.95■□□□□ 0.62
PROM1O43490 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.94■□□□□ 0.62
PROM1O43490 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
PROM1O43490 AC112907.3-201ENST00000577781 2400 ntBASIC18.94■□□□□ 0.62
PROM1O43490 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PROM1O43490 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
PROM1O43490 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PROM1O43490 BX119927.1-201ENST00000636596 1552 ntBASIC18.94■□□□□ 0.62
PROM1O43490 KRT8P20-201ENST00000423953 1409 ntBASIC18.94■□□□□ 0.62
PROM1O43490 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.94■□□□□ 0.62
PROM1O43490 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
PROM1O43490 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
PROM1O43490 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.94■□□□□ 0.62
PROM1O43490 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.94■□□□□ 0.62
PROM1O43490 AC098934.4-201ENST00000564127 592 ntBASIC18.94■□□□□ 0.62
PROM1O43490 AL031963.3-201ENST00000606441 850 ntBASIC18.94■□□□□ 0.62
PROM1O43490 AC133041.1-202ENST00000642053 222 ntBASIC18.94■□□□□ 0.62
PROM1O43490 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PROM1O43490 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PROM1O43490 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PROM1O43490 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.94■□□□□ 0.62
PROM1O43490 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.94■□□□□ 0.62
PROM1O43490 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.94■□□□□ 0.62
PROM1O43490 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PROM1O43490 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
PROM1O43490 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
PROM1O43490 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PROM1O43490 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PROM1O43490 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PROM1O43490 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PROM1O43490 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.93■□□□□ 0.62
PROM1O43490 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PROM1O43490 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PROM1O43490 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.93■□□□□ 0.62
PROM1O43490 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.93■□□□□ 0.62
PROM1O43490 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
PROM1O43490 TMEM191A-211ENST00000637163 1067 ntBASIC18.93■□□□□ 0.62
PROM1O43490 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PROM1O43490 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PROM1O43490 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PROM1O43490 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PROM1O43490 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.93■□□□□ 0.62
PROM1O43490 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PROM1O43490 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
PROM1O43490 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PROM1O43490 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
PROM1O43490 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PROM1O43490 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
PROM1O43490 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PROM1O43490 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
PROM1O43490 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
PROM1O43490 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PROM1O43490 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.92■□□□□ 0.62
PROM1O43490 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PROM1O43490 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.92■□□□□ 0.62
PROM1O43490 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PROM1O43490 AL355802.2-201ENST00000402069 882 ntBASIC18.92■□□□□ 0.62
PROM1O43490 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
PROM1O43490 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms