Protein–RNA interactions for Protein: O15269

SPTLC1, Serine palmitoyltransferase 1, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1O15269 LY6E-205ENST00000519611 635 ntTSL 3 BASIC21.41■■□□□ 1.02
SPTLC1O15269 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC21.41■■□□□ 1.02
SPTLC1O15269 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC21.41■■□□□ 1.02
SPTLC1O15269 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC21.41■■□□□ 1.02
SPTLC1O15269 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC21.41■■□□□ 1.02
SPTLC1O15269 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC21.41■■□□□ 1.02
SPTLC1O15269 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SPTLC1O15269 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SPTLC1O15269 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SPTLC1O15269 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SPTLC1O15269 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SPTLC1O15269 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC21.4■■□□□ 1.02
SPTLC1O15269 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC21.4■■□□□ 1.02
SPTLC1O15269 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SPTLC1O15269 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SPTLC1O15269 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC21.4■■□□□ 1.02
SPTLC1O15269 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SPTLC1O15269 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC21.4■■□□□ 1.02
SPTLC1O15269 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC21.4■■□□□ 1.02
SPTLC1O15269 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SPTLC1O15269 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC21.4■■□□□ 1.02
SPTLC1O15269 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC21.4■■□□□ 1.02
SPTLC1O15269 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
SPTLC1O15269 AC124016.1-201ENST00000609552 612 ntBASIC21.4■■□□□ 1.02
SPTLC1O15269 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SPTLC1O15269 AC073912.3-201ENST00000624414 853 ntBASIC21.4■■□□□ 1.02
SPTLC1O15269 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC21.4■■□□□ 1.02
SPTLC1O15269 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
SPTLC1O15269 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SPTLC1O15269 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
SPTLC1O15269 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SPTLC1O15269 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SPTLC1O15269 AC020907.5-201ENST00000624372 1936 ntBASIC21.39■■□□□ 1.02
SPTLC1O15269 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
SPTLC1O15269 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
SPTLC1O15269 MME-217ENST00000616757 1315 ntTSL 5 BASIC21.39■■□□□ 1.01
SPTLC1O15269 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SPTLC1O15269 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SPTLC1O15269 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SPTLC1O15269 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SPTLC1O15269 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC21.39■■□□□ 1.01
SPTLC1O15269 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC21.39■■□□□ 1.01
SPTLC1O15269 FAM210CP-201ENST00000445714 574 ntBASIC21.39■■□□□ 1.01
SPTLC1O15269 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC21.39■■□□□ 1.01
SPTLC1O15269 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC21.39■■□□□ 1.01
SPTLC1O15269 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC21.39■■□□□ 1.01
SPTLC1O15269 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC21.39■■□□□ 1.01
SPTLC1O15269 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SPTLC1O15269 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
SPTLC1O15269 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SPTLC1O15269 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC21.39■■□□□ 1.01
SPTLC1O15269 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
SPTLC1O15269 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SPTLC1O15269 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SPTLC1O15269 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SPTLC1O15269 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
SPTLC1O15269 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
SPTLC1O15269 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC21.38■■□□□ 1.01
SPTLC1O15269 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SPTLC1O15269 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SPTLC1O15269 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SPTLC1O15269 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SPTLC1O15269 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
SPTLC1O15269 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SPTLC1O15269 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC21.38■■□□□ 1.01
SPTLC1O15269 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC21.38■■□□□ 1.01
SPTLC1O15269 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
SPTLC1O15269 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC21.38■■□□□ 1.01
SPTLC1O15269 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
SPTLC1O15269 FAM197Y4-202ENST00000622692 608 ntBASIC21.38■■□□□ 1.01
SPTLC1O15269 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SPTLC1O15269 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SPTLC1O15269 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SPTLC1O15269 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
SPTLC1O15269 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SPTLC1O15269 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SPTLC1O15269 DET1-207ENST00000564406 2315 ntTSL 2 BASIC21.38■■□□□ 1.01
SPTLC1O15269 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC21.38■■□□□ 1.01
SPTLC1O15269 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SPTLC1O15269 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SPTLC1O15269 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC21.37■■□□□ 1.01
SPTLC1O15269 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SPTLC1O15269 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
SPTLC1O15269 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
SPTLC1O15269 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
SPTLC1O15269 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC21.37■■□□□ 1.01
SPTLC1O15269 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
SPTLC1O15269 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SPTLC1O15269 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
SPTLC1O15269 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC21.37■■□□□ 1.01
SPTLC1O15269 TK2-204ENST00000525974 1178 ntTSL 2 BASIC21.37■■□□□ 1.01
SPTLC1O15269 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC21.37■■□□□ 1.01
SPTLC1O15269 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC21.37■■□□□ 1.01
SPTLC1O15269 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC21.37■■□□□ 1.01
SPTLC1O15269 SPIB-206ENST00000596074 847 ntTSL 2 BASIC21.37■■□□□ 1.01
SPTLC1O15269 Six3os1_6.1-201ENST00000620790 196 ntBASIC21.37■■□□□ 1.01
SPTLC1O15269 AL121829.2-201ENST00000620908 328 ntBASIC21.37■■□□□ 1.01
SPTLC1O15269 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC21.37■■□□□ 1.01
SPTLC1O15269 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SPTLC1O15269 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms