Protein–RNA interactions for Protein: O00268

TAF4, Transcription initiation factor TFIID subunit 4, humanhuman

Predictions only

Length 1,085 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TAF4O00268 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
TAF4O00268 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.53■□□□□ 0.72
TAF4O00268 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.53■□□□□ 0.72
TAF4O00268 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TAF4O00268 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.52■□□□□ 0.72
TAF4O00268 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
TAF4O00268 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TAF4O00268 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
TAF4O00268 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TAF4O00268 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TAF4O00268 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
TAF4O00268 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.52■□□□□ 0.72
TAF4O00268 NTF6B-201ENST00000591913 560 ntBASIC19.52■□□□□ 0.72
TAF4O00268 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
TAF4O00268 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
TAF4O00268 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TAF4O00268 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TAF4O00268 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
TAF4O00268 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
TAF4O00268 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.52■□□□□ 0.71
TAF4O00268 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.52■□□□□ 0.71
TAF4O00268 LINC01960-201ENST00000563759 1884 ntBASIC19.52■□□□□ 0.71
TAF4O00268 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
TAF4O00268 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.51■□□□□ 0.71
TAF4O00268 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TAF4O00268 AL157384.1-201ENST00000445995 2473 ntBASIC19.51■□□□□ 0.71
TAF4O00268 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TAF4O00268 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.51■□□□□ 0.71
TAF4O00268 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TAF4O00268 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
TAF4O00268 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
TAF4O00268 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TAF4O00268 KRT18P57-201ENST00000443599 1254 ntBASIC19.51■□□□□ 0.71
TAF4O00268 CDV3P1-201ENST00000471403 739 ntBASIC19.51■□□□□ 0.71
TAF4O00268 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
TAF4O00268 AL121894.2-201ENST00000602977 491 ntBASIC19.51■□□□□ 0.71
TAF4O00268 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.51■□□□□ 0.71
TAF4O00268 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC19.51■□□□□ 0.71
TAF4O00268 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TAF4O00268 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TAF4O00268 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.51■□□□□ 0.71
TAF4O00268 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TAF4O00268 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.51■□□□□ 0.71
TAF4O00268 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.5■□□□□ 0.71
TAF4O00268 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
TAF4O00268 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.5■□□□□ 0.71
TAF4O00268 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.5■□□□□ 0.71
TAF4O00268 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TAF4O00268 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.5■□□□□ 0.71
TAF4O00268 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TAF4O00268 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.5■□□□□ 0.71
TAF4O00268 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TAF4O00268 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.5■□□□□ 0.71
TAF4O00268 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.5■□□□□ 0.71
TAF4O00268 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TAF4O00268 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC19.5■□□□□ 0.71
TAF4O00268 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.5■□□□□ 0.71
TAF4O00268 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.5■□□□□ 0.71
TAF4O00268 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TAF4O00268 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TAF4O00268 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TAF4O00268 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TAF4O00268 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TAF4O00268 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.5■□□□□ 0.71
TAF4O00268 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
TAF4O00268 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TAF4O00268 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
TAF4O00268 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TAF4O00268 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.49■□□□□ 0.71
TAF4O00268 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
TAF4O00268 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
TAF4O00268 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
TAF4O00268 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TAF4O00268 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
TAF4O00268 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.49■□□□□ 0.71
TAF4O00268 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TAF4O00268 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TAF4O00268 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.49■□□□□ 0.71
TAF4O00268 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TAF4O00268 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.49■□□□□ 0.71
TAF4O00268 KRT8P9-201ENST00000558927 1449 ntBASIC19.49■□□□□ 0.71
TAF4O00268 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TAF4O00268 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TAF4O00268 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.49■□□□□ 0.71
TAF4O00268 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TAF4O00268 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TAF4O00268 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.48■□□□□ 0.71
TAF4O00268 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TAF4O00268 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TAF4O00268 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.48■□□□□ 0.71
TAF4O00268 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TAF4O00268 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TAF4O00268 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TAF4O00268 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
TAF4O00268 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TAF4O00268 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC19.48■□□□□ 0.71
TAF4O00268 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TAF4O00268 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.48■□□□□ 0.71
TAF4O00268 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC19.48■□□□□ 0.71
TAF4O00268 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms