Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TLR4O00206 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
TLR4O00206 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TLR4O00206 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TLR4O00206 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.83■□□□□ 0.77
TLR4O00206 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.83■□□□□ 0.77
TLR4O00206 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TLR4O00206 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.83■□□□□ 0.77
TLR4O00206 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
TLR4O00206 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.83■□□□□ 0.77
TLR4O00206 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.83■□□□□ 0.76
TLR4O00206 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
TLR4O00206 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.83■□□□□ 0.76
TLR4O00206 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
TLR4O00206 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
TLR4O00206 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TLR4O00206 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TLR4O00206 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.83■□□□□ 0.76
TLR4O00206 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
TLR4O00206 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TLR4O00206 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC19.82■□□□□ 0.76
TLR4O00206 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TLR4O00206 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
TLR4O00206 AC124283.5-201ENST00000624661 1809 ntBASIC19.82■□□□□ 0.76
TLR4O00206 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
TLR4O00206 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
TLR4O00206 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TLR4O00206 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC19.82■□□□□ 0.76
TLR4O00206 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.82■□□□□ 0.76
TLR4O00206 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.82■□□□□ 0.76
TLR4O00206 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.82■□□□□ 0.76
TLR4O00206 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.82■□□□□ 0.76
TLR4O00206 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.82■□□□□ 0.76
TLR4O00206 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.82■□□□□ 0.76
TLR4O00206 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC19.82■□□□□ 0.76
TLR4O00206 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.82■□□□□ 0.76
TLR4O00206 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.82■□□□□ 0.76
TLR4O00206 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC19.82■□□□□ 0.76
TLR4O00206 AL049796.1-201ENST00000565336 1766 ntBASIC19.82■□□□□ 0.76
TLR4O00206 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TLR4O00206 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TLR4O00206 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TLR4O00206 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TLR4O00206 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TLR4O00206 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.81■□□□□ 0.76
TLR4O00206 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.81■□□□□ 0.76
TLR4O00206 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.81■□□□□ 0.76
TLR4O00206 NBPF21P-201ENST00000425093 1451 ntBASIC19.81■□□□□ 0.76
TLR4O00206 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TLR4O00206 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TLR4O00206 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.81■□□□□ 0.76
TLR4O00206 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TLR4O00206 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TLR4O00206 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
TLR4O00206 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TLR4O00206 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TLR4O00206 FAM210CP-201ENST00000445714 574 ntBASIC19.81■□□□□ 0.76
TLR4O00206 KRT16P5-201ENST00000455284 522 ntBASIC19.81■□□□□ 0.76
TLR4O00206 TSPY15P-201ENST00000457163 923 ntBASIC19.81■□□□□ 0.76
TLR4O00206 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19.81■□□□□ 0.76
TLR4O00206 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TLR4O00206 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TLR4O00206 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TLR4O00206 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
TLR4O00206 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TLR4O00206 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
TLR4O00206 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.81■□□□□ 0.76
TLR4O00206 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
TLR4O00206 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.81■□□□□ 0.76
TLR4O00206 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TLR4O00206 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TLR4O00206 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
TLR4O00206 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.8■□□□□ 0.76
TLR4O00206 SLC25A24-204ENST00000569674 2357 ntBASIC19.8■□□□□ 0.76
TLR4O00206 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
TLR4O00206 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.8■□□□□ 0.76
TLR4O00206 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.8■□□□□ 0.76
TLR4O00206 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TLR4O00206 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
TLR4O00206 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TLR4O00206 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TLR4O00206 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC19.8■□□□□ 0.76
TLR4O00206 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TLR4O00206 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC19.8■□□□□ 0.76
TLR4O00206 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.8■□□□□ 0.76
TLR4O00206 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.8■□□□□ 0.76
TLR4O00206 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TLR4O00206 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.8■□□□□ 0.76
TLR4O00206 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TLR4O00206 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
TLR4O00206 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TLR4O00206 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
TLR4O00206 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TLR4O00206 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
TLR4O00206 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.8■□□□□ 0.76
TLR4O00206 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TLR4O00206 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TLR4O00206 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.79■□□□□ 0.76
TLR4O00206 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.79■□□□□ 0.76
TLR4O00206 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms