Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC22.51■■□□□ 1.19
DDX39AO00148 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
DDX39AO00148 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
DDX39AO00148 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
DDX39AO00148 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC22.51■■□□□ 1.19
DDX39AO00148 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
DDX39AO00148 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
DDX39AO00148 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
DDX39AO00148 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
DDX39AO00148 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
DDX39AO00148 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
DDX39AO00148 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
DDX39AO00148 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
DDX39AO00148 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
DDX39AO00148 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC22.5■■□□□ 1.19
DDX39AO00148 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC22.5■■□□□ 1.19
DDX39AO00148 LY6E-205ENST00000519611 635 ntTSL 3 BASIC22.5■■□□□ 1.19
DDX39AO00148 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC22.5■■□□□ 1.19
DDX39AO00148 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC22.5■■□□□ 1.19
DDX39AO00148 SPIB-206ENST00000596074 847 ntTSL 2 BASIC22.5■■□□□ 1.19
DDX39AO00148 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC22.5■■□□□ 1.19
DDX39AO00148 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
DDX39AO00148 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC22.5■■□□□ 1.19
DDX39AO00148 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
DDX39AO00148 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
DDX39AO00148 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
DDX39AO00148 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
DDX39AO00148 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
DDX39AO00148 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC22.49■■□□□ 1.19
DDX39AO00148 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
DDX39AO00148 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
DDX39AO00148 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC22.49■■□□□ 1.19
DDX39AO00148 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC22.49■■□□□ 1.19
DDX39AO00148 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
DDX39AO00148 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC22.49■■□□□ 1.19
DDX39AO00148 AC239809.2-201ENST00000415381 517 ntBASIC22.49■■□□□ 1.19
DDX39AO00148 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC22.49■■□□□ 1.19
DDX39AO00148 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
DDX39AO00148 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
DDX39AO00148 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC22.49■■□□□ 1.19
DDX39AO00148 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
DDX39AO00148 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
DDX39AO00148 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
DDX39AO00148 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
DDX39AO00148 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
DDX39AO00148 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
DDX39AO00148 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
DDX39AO00148 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
DDX39AO00148 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
DDX39AO00148 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
DDX39AO00148 ISG20-202ENST00000379224 540 ntTSL 3 BASIC22.48■■□□□ 1.19
DDX39AO00148 KRASP1-201ENST00000407852 552 ntBASIC22.48■■□□□ 1.19
DDX39AO00148 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC22.48■■□□□ 1.19
DDX39AO00148 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
DDX39AO00148 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC22.48■■□□□ 1.19
DDX39AO00148 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
DDX39AO00148 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
DDX39AO00148 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
DDX39AO00148 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC22.48■■□□□ 1.19
DDX39AO00148 AC092667.1-201ENST00000434301 2586 ntBASIC22.47■■□□□ 1.19
DDX39AO00148 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
DDX39AO00148 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
DDX39AO00148 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC22.47■■□□□ 1.19
DDX39AO00148 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
DDX39AO00148 AC020907.5-201ENST00000624372 1936 ntBASIC22.47■■□□□ 1.19
DDX39AO00148 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
DDX39AO00148 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC22.47■■□□□ 1.19
DDX39AO00148 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC22.47■■□□□ 1.19
DDX39AO00148 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
DDX39AO00148 SERF2-207ENST00000409614 582 ntTSL 2 BASIC22.47■■□□□ 1.19
DDX39AO00148 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC22.47■■□□□ 1.19
DDX39AO00148 TK2-204ENST00000525974 1178 ntTSL 2 BASIC22.47■■□□□ 1.19
DDX39AO00148 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC22.47■■□□□ 1.19
DDX39AO00148 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
DDX39AO00148 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
DDX39AO00148 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
DDX39AO00148 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC22.47■■□□□ 1.19
DDX39AO00148 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
DDX39AO00148 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC22.47■■□□□ 1.19
DDX39AO00148 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
DDX39AO00148 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
DDX39AO00148 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
DDX39AO00148 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
DDX39AO00148 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC22.46■■□□□ 1.19
DDX39AO00148 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
DDX39AO00148 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
DDX39AO00148 BAALC-201ENST00000297574 801 ntTSL 3 BASIC22.46■■□□□ 1.19
DDX39AO00148 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC22.46■■□□□ 1.19
DDX39AO00148 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC22.46■■□□□ 1.19
DDX39AO00148 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC22.46■■□□□ 1.19
DDX39AO00148 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC22.46■■□□□ 1.19
DDX39AO00148 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC22.46■■□□□ 1.19
DDX39AO00148 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC22.46■■□□□ 1.19
DDX39AO00148 USP36-216ENST00000589424 970 ntTSL 5 BASIC22.46■■□□□ 1.19
DDX39AO00148 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
DDX39AO00148 AC124016.1-201ENST00000609552 612 ntBASIC22.46■■□□□ 1.19
DDX39AO00148 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC22.46■■□□□ 1.19
DDX39AO00148 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
DDX39AO00148 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
DDX39AO00148 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC22.46■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms