Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NPIPA3F8WFD2 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NPIPA3F8WFD2 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NPIPA3F8WFD2 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.2■□□□□ 0.5
NPIPA3F8WFD2 MIR718-201ENST00000390190 70 ntBASIC18.2■□□□□ 0.5
NPIPA3F8WFD2 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC18.2■□□□□ 0.5
NPIPA3F8WFD2 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
NPIPA3F8WFD2 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NPIPA3F8WFD2 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.2■□□□□ 0.5
NPIPA3F8WFD2 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.2■□□□□ 0.5
NPIPA3F8WFD2 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
NPIPA3F8WFD2 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NPIPA3F8WFD2 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NPIPA3F8WFD2 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
NPIPA3F8WFD2 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NPIPA3F8WFD2 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NPIPA3F8WFD2 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NPIPA3F8WFD2 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NPIPA3F8WFD2 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NPIPA3F8WFD2 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NPIPA3F8WFD2 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.19■□□□□ 0.5
NPIPA3F8WFD2 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
NPIPA3F8WFD2 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NPIPA3F8WFD2 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NPIPA3F8WFD2 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
NPIPA3F8WFD2 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
NPIPA3F8WFD2 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NPIPA3F8WFD2 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NPIPA3F8WFD2 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NPIPA3F8WFD2 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
NPIPA3F8WFD2 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.19■□□□□ 0.5
NPIPA3F8WFD2 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC18.19■□□□□ 0.5
NPIPA3F8WFD2 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.19■□□□□ 0.5
NPIPA3F8WFD2 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NPIPA3F8WFD2 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NPIPA3F8WFD2 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC18.19■□□□□ 0.5
NPIPA3F8WFD2 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.19■□□□□ 0.5
NPIPA3F8WFD2 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
NPIPA3F8WFD2 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.19■□□□□ 0.5
NPIPA3F8WFD2 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
NPIPA3F8WFD2 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NPIPA3F8WFD2 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.19■□□□□ 0.5
NPIPA3F8WFD2 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.19■□□□□ 0.5
NPIPA3F8WFD2 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
NPIPA3F8WFD2 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.19■□□□□ 0.5
NPIPA3F8WFD2 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
NPIPA3F8WFD2 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC18.18■□□□□ 0.5
NPIPA3F8WFD2 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
NPIPA3F8WFD2 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.18■□□□□ 0.5
NPIPA3F8WFD2 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NPIPA3F8WFD2 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
NPIPA3F8WFD2 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
NPIPA3F8WFD2 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NPIPA3F8WFD2 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NPIPA3F8WFD2 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.18■□□□□ 0.5
NPIPA3F8WFD2 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC18.18■□□□□ 0.5
NPIPA3F8WFD2 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NPIPA3F8WFD2 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
NPIPA3F8WFD2 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
NPIPA3F8WFD2 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NPIPA3F8WFD2 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.18■□□□□ 0.5
NPIPA3F8WFD2 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.18■□□□□ 0.5
NPIPA3F8WFD2 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.18■□□□□ 0.5
NPIPA3F8WFD2 AL023875.1-201ENST00000640777 796 ntBASIC18.18■□□□□ 0.5
NPIPA3F8WFD2 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NPIPA3F8WFD2 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.18■□□□□ 0.5
NPIPA3F8WFD2 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NPIPA3F8WFD2 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NPIPA3F8WFD2 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NPIPA3F8WFD2 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
NPIPA3F8WFD2 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NPIPA3F8WFD2 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NPIPA3F8WFD2 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
NPIPA3F8WFD2 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.18■□□□□ 0.5
NPIPA3F8WFD2 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.18■□□□□ 0.5
NPIPA3F8WFD2 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
NPIPA3F8WFD2 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
NPIPA3F8WFD2 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
NPIPA3F8WFD2 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.17■□□□□ 0.5
NPIPA3F8WFD2 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.17■□□□□ 0.5
NPIPA3F8WFD2 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NPIPA3F8WFD2 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
NPIPA3F8WFD2 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
NPIPA3F8WFD2 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NPIPA3F8WFD2 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NPIPA3F8WFD2 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
NPIPA3F8WFD2 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
NPIPA3F8WFD2 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
NPIPA3F8WFD2 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.17■□□□□ 0.5
NPIPA3F8WFD2 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NPIPA3F8WFD2 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
NPIPA3F8WFD2 ARL16-209ENST00000573715 763 ntTSL 3 BASIC18.17■□□□□ 0.5
NPIPA3F8WFD2 ARL16-211ENST00000576135 694 ntTSL 3 BASIC18.17■□□□□ 0.5
NPIPA3F8WFD2 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NPIPA3F8WFD2 MTDHP1-201ENST00000605323 784 ntBASIC18.17■□□□□ 0.5
NPIPA3F8WFD2 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
NPIPA3F8WFD2 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.17■□□□□ 0.5
NPIPA3F8WFD2 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NPIPA3F8WFD2 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.17■□□□□ 0.5
NPIPA3F8WFD2 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms