Protein–RNA interactions for Protein: E9PGA6

C1QTNF3-AMACR, C1QTNF3-AMACR readthrough (NMD candidate), humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-AMACRE9PGA6 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
C1QTNF3-AMACRE9PGA6 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.06■□□□□ 0.8
C1QTNF3-AMACRE9PGA6 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
C1QTNF3-AMACRE9PGA6 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
C1QTNF3-AMACRE9PGA6 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.06■□□□□ 0.8
C1QTNF3-AMACRE9PGA6 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
C1QTNF3-AMACRE9PGA6 RPS2P55-201ENST00000397318 883 ntBASIC20.06■□□□□ 0.8
C1QTNF3-AMACRE9PGA6 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
C1QTNF3-AMACRE9PGA6 KRT16P6-202ENST00000425692 1426 ntBASIC20.06■□□□□ 0.8
C1QTNF3-AMACRE9PGA6 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
C1QTNF3-AMACRE9PGA6 AC107956.1-201ENST00000494359 873 ntBASIC20.06■□□□□ 0.8
C1QTNF3-AMACRE9PGA6 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
C1QTNF3-AMACRE9PGA6 MIR4497-201ENST00000583208 89 ntBASIC20.06■□□□□ 0.8
C1QTNF3-AMACRE9PGA6 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.06■□□□□ 0.8
C1QTNF3-AMACRE9PGA6 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
C1QTNF3-AMACRE9PGA6 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC20.06■□□□□ 0.8
C1QTNF3-AMACRE9PGA6 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC20.05■□□□□ 0.8
C1QTNF3-AMACRE9PGA6 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
C1QTNF3-AMACRE9PGA6 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
C1QTNF3-AMACRE9PGA6 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.05■□□□□ 0.8
C1QTNF3-AMACRE9PGA6 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
C1QTNF3-AMACRE9PGA6 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
C1QTNF3-AMACRE9PGA6 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
C1QTNF3-AMACRE9PGA6 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
C1QTNF3-AMACRE9PGA6 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
C1QTNF3-AMACRE9PGA6 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
C1QTNF3-AMACRE9PGA6 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
C1QTNF3-AMACRE9PGA6 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
C1QTNF3-AMACRE9PGA6 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
C1QTNF3-AMACRE9PGA6 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.05■□□□□ 0.8
C1QTNF3-AMACRE9PGA6 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
C1QTNF3-AMACRE9PGA6 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
C1QTNF3-AMACRE9PGA6 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC20.05■□□□□ 0.8
C1QTNF3-AMACRE9PGA6 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.05■□□□□ 0.8
C1QTNF3-AMACRE9PGA6 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC20.05■□□□□ 0.8
C1QTNF3-AMACRE9PGA6 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20.05■□□□□ 0.8
C1QTNF3-AMACRE9PGA6 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC20.05■□□□□ 0.8
C1QTNF3-AMACRE9PGA6 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.05■□□□□ 0.8
C1QTNF3-AMACRE9PGA6 AC004264.1-201ENST00000608354 794 ntBASIC20.05■□□□□ 0.8
C1QTNF3-AMACRE9PGA6 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
C1QTNF3-AMACRE9PGA6 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC20.05■□□□□ 0.8
C1QTNF3-AMACRE9PGA6 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
C1QTNF3-AMACRE9PGA6 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.05■□□□□ 0.8
C1QTNF3-AMACRE9PGA6 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.05■□□□□ 0.8
C1QTNF3-AMACRE9PGA6 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
C1QTNF3-AMACRE9PGA6 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
C1QTNF3-AMACRE9PGA6 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
C1QTNF3-AMACRE9PGA6 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
C1QTNF3-AMACRE9PGA6 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
C1QTNF3-AMACRE9PGA6 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
C1QTNF3-AMACRE9PGA6 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
C1QTNF3-AMACRE9PGA6 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC20.04■□□□□ 0.8
C1QTNF3-AMACRE9PGA6 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.04■□□□□ 0.8
C1QTNF3-AMACRE9PGA6 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
C1QTNF3-AMACRE9PGA6 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
C1QTNF3-AMACRE9PGA6 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC20.04■□□□□ 0.8
C1QTNF3-AMACRE9PGA6 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
C1QTNF3-AMACRE9PGA6 KRT16P5-201ENST00000455284 522 ntBASIC20.04■□□□□ 0.8
C1QTNF3-AMACRE9PGA6 SNORA78-201ENST00000459373 127 ntBASIC20.04■□□□□ 0.8
C1QTNF3-AMACRE9PGA6 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
C1QTNF3-AMACRE9PGA6 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
C1QTNF3-AMACRE9PGA6 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.04■□□□□ 0.8
C1QTNF3-AMACRE9PGA6 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.04■□□□□ 0.8
C1QTNF3-AMACRE9PGA6 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
C1QTNF3-AMACRE9PGA6 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
C1QTNF3-AMACRE9PGA6 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
C1QTNF3-AMACRE9PGA6 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
C1QTNF3-AMACRE9PGA6 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
C1QTNF3-AMACRE9PGA6 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
C1QTNF3-AMACRE9PGA6 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
C1QTNF3-AMACRE9PGA6 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
C1QTNF3-AMACRE9PGA6 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC20.03■□□□□ 0.8
C1QTNF3-AMACRE9PGA6 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
C1QTNF3-AMACRE9PGA6 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
C1QTNF3-AMACRE9PGA6 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
C1QTNF3-AMACRE9PGA6 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.03■□□□□ 0.8
C1QTNF3-AMACRE9PGA6 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
C1QTNF3-AMACRE9PGA6 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
C1QTNF3-AMACRE9PGA6 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
C1QTNF3-AMACRE9PGA6 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC20.03■□□□□ 0.8
C1QTNF3-AMACRE9PGA6 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
C1QTNF3-AMACRE9PGA6 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
C1QTNF3-AMACRE9PGA6 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
C1QTNF3-AMACRE9PGA6 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
C1QTNF3-AMACRE9PGA6 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
C1QTNF3-AMACRE9PGA6 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
C1QTNF3-AMACRE9PGA6 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
C1QTNF3-AMACRE9PGA6 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
C1QTNF3-AMACRE9PGA6 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
C1QTNF3-AMACRE9PGA6 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
C1QTNF3-AMACRE9PGA6 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
C1QTNF3-AMACRE9PGA6 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC20.02■□□□□ 0.8
C1QTNF3-AMACRE9PGA6 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
C1QTNF3-AMACRE9PGA6 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC20.02■□□□□ 0.8
C1QTNF3-AMACRE9PGA6 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC20.02■□□□□ 0.8
C1QTNF3-AMACRE9PGA6 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
C1QTNF3-AMACRE9PGA6 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
C1QTNF3-AMACRE9PGA6 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
C1QTNF3-AMACRE9PGA6 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
C1QTNF3-AMACRE9PGA6 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms