Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
LINC01546A6NGU7 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
LINC01546A6NGU7 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LINC01546A6NGU7 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
LINC01546A6NGU7 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
LINC01546A6NGU7 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LINC01546A6NGU7 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LINC01546A6NGU7 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LINC01546A6NGU7 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC14.13□□□□□ -0.15
LINC01546A6NGU7 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC14.13□□□□□ -0.15
LINC01546A6NGU7 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC14.13□□□□□ -0.15
LINC01546A6NGU7 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC14.13□□□□□ -0.15
LINC01546A6NGU7 AC008175.2-201ENST00000612840 297 ntBASIC14.13□□□□□ -0.15
LINC01546A6NGU7 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC14.13□□□□□ -0.15
LINC01546A6NGU7 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
LINC01546A6NGU7 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LINC01546A6NGU7 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LINC01546A6NGU7 AL031598.1-201ENST00000561511 1773 ntBASIC14.13□□□□□ -0.15
LINC01546A6NGU7 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LINC01546A6NGU7 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
LINC01546A6NGU7 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
LINC01546A6NGU7 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LINC01546A6NGU7 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LINC01546A6NGU7 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LINC01546A6NGU7 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
LINC01546A6NGU7 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
LINC01546A6NGU7 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LINC01546A6NGU7 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC14.12□□□□□ -0.15
LINC01546A6NGU7 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC14.12□□□□□ -0.15
LINC01546A6NGU7 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC14.12□□□□□ -0.15
LINC01546A6NGU7 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC14.12□□□□□ -0.15
LINC01546A6NGU7 WAC-202ENST00000347934 2839 ntTSL 5 BASIC14.12□□□□□ -0.15
LINC01546A6NGU7 EFTUD1P1-204ENST00000560401 1798 ntBASIC14.12□□□□□ -0.15
LINC01546A6NGU7 AL161938.1-201ENST00000569833 2180 ntBASIC14.12□□□□□ -0.15
LINC01546A6NGU7 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC01546A6NGU7 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC01546A6NGU7 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
LINC01546A6NGU7 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC01546A6NGU7 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC14.12□□□□□ -0.15
LINC01546A6NGU7 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC14.12□□□□□ -0.15
LINC01546A6NGU7 KRT16P2-201ENST00000414673 1423 ntBASIC14.12□□□□□ -0.15
LINC01546A6NGU7 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LINC01546A6NGU7 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
LINC01546A6NGU7 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC14.12□□□□□ -0.15
LINC01546A6NGU7 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC01546A6NGU7 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC01546A6NGU7 USP49-202ENST00000373010 2446 ntTSL 5 BASIC14.12□□□□□ -0.15
LINC01546A6NGU7 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC14.12□□□□□ -0.15
LINC01546A6NGU7 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC01546A6NGU7 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
LINC01546A6NGU7 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC01546A6NGU7 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC01546A6NGU7 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC14.12□□□□□ -0.15
LINC01546A6NGU7 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC01546A6NGU7 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
LINC01546A6NGU7 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC01546A6NGU7 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LINC01546A6NGU7 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC14.11□□□□□ -0.15
LINC01546A6NGU7 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC14.11□□□□□ -0.15
LINC01546A6NGU7 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LINC01546A6NGU7 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC14.11□□□□□ -0.15
LINC01546A6NGU7 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LINC01546A6NGU7 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC14.11□□□□□ -0.15
LINC01546A6NGU7 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
LINC01546A6NGU7 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC14.11□□□□□ -0.15
LINC01546A6NGU7 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC01546A6NGU7 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC01546A6NGU7 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC01546A6NGU7 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC01546A6NGU7 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC01546A6NGU7 AC239859.2-201ENST00000444165 318 ntBASIC14.11□□□□□ -0.15
LINC01546A6NGU7 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC14.11□□□□□ -0.15
LINC01546A6NGU7 DUX4L19-201ENST00000557448 1267 ntBASIC14.11□□□□□ -0.15
LINC01546A6NGU7 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC14.11□□□□□ -0.15
LINC01546A6NGU7 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC01546A6NGU7 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LINC01546A6NGU7 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC14.11□□□□□ -0.15
LINC01546A6NGU7 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC14.11□□□□□ -0.15
LINC01546A6NGU7 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LINC01546A6NGU7 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
LINC01546A6NGU7 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC14.11□□□□□ -0.15
LINC01546A6NGU7 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LINC01546A6NGU7 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
LINC01546A6NGU7 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LINC01546A6NGU7 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC01546A6NGU7 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC14.11□□□□□ -0.15
LINC01546A6NGU7 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC14.11□□□□□ -0.15
LINC01546A6NGU7 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC01546A6NGU7 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC01546A6NGU7 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC01546A6NGU7 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
LINC01546A6NGU7 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC01546A6NGU7 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC01546A6NGU7 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC01546A6NGU7 AP001271.2-201ENST00000624018 1556 ntBASIC14.1□□□□□ -0.15
LINC01546A6NGU7 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
LINC01546A6NGU7 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC01546A6NGU7 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC01546A6NGU7 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC14.1□□□□□ -0.15
LINC01546A6NGU7 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms