Protein–RNA interactions for Protein: A0A0B4J234

TRAV2, T-cell receptor alpha variable 2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV2A0A0B4J234 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV2A0A0B4J234 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV2A0A0B4J234 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV2A0A0B4J234 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC15.1■□□□□ 0.01
TRAV2A0A0B4J234 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV2A0A0B4J234 AIRN-201ENST00000601203 4374 ntBASIC15.1■□□□□ 0.01
TRAV2A0A0B4J234 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV2A0A0B4J234 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC15.1■□□□□ 0.01
TRAV2A0A0B4J234 HLA-G-202ENST00000376815 851 ntBASIC15.1■□□□□ 0.01
TRAV2A0A0B4J234 HLA-G-203ENST00000376818 1127 ntBASIC15.1■□□□□ 0.01
TRAV2A0A0B4J234 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV2A0A0B4J234 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
TRAV2A0A0B4J234 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV2A0A0B4J234 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
TRAV2A0A0B4J234 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC15.1■□□□□ 0.01
TRAV2A0A0B4J234 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC15.1■□□□□ 0.01
TRAV2A0A0B4J234 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC15.1■□□□□ 0.01
TRAV2A0A0B4J234 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC15.1■□□□□ 0.01
TRAV2A0A0B4J234 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC15.1■□□□□ 0.01
TRAV2A0A0B4J234 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC15.1■□□□□ 0.01
TRAV2A0A0B4J234 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV2A0A0B4J234 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC15.1■□□□□ 0.01
TRAV2A0A0B4J234 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC15.1■□□□□ 0.01
TRAV2A0A0B4J234 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC15.1■□□□□ 0.01
TRAV2A0A0B4J234 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV2A0A0B4J234 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC15.1■□□□□ 0.01
TRAV2A0A0B4J234 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV2A0A0B4J234 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV2A0A0B4J234 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV2A0A0B4J234 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
TRAV2A0A0B4J234 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC15.1■□□□□ 0.01
TRAV2A0A0B4J234 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV2A0A0B4J234 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV2A0A0B4J234 DPP3P2-201ENST00000416030 1696 ntBASIC15.09■□□□□ 0.01
TRAV2A0A0B4J234 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC15.09■□□□□ 0.01
TRAV2A0A0B4J234 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV2A0A0B4J234 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC15.09■□□□□ 0.01
TRAV2A0A0B4J234 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
TRAV2A0A0B4J234 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV2A0A0B4J234 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC15.09■□□□□ 0.01
TRAV2A0A0B4J234 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV2A0A0B4J234 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC15.09■□□□□ 0.01
TRAV2A0A0B4J234 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV2A0A0B4J234 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV2A0A0B4J234 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV2A0A0B4J234 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC15.09■□□□□ 0.01
TRAV2A0A0B4J234 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
TRAV2A0A0B4J234 AL138781.1-201ENST00000566567 1274 ntBASIC15.09■□□□□ 0.01
TRAV2A0A0B4J234 AC142086.2-201ENST00000569753 217 ntBASIC15.09■□□□□ 0.01
TRAV2A0A0B4J234 AL031963.3-201ENST00000606441 850 ntBASIC15.09■□□□□ 0.01
TRAV2A0A0B4J234 AC133041.1-202ENST00000642053 222 ntBASIC15.09■□□□□ 0.01
TRAV2A0A0B4J234 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV2A0A0B4J234 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV2A0A0B4J234 STK25-205ENST00000405883 1904 ntTSL 2 BASIC15.09■□□□□ 0.01
TRAV2A0A0B4J234 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC15.09■□□□□ 0.01
TRAV2A0A0B4J234 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC15.09■□□□□ 0.01
TRAV2A0A0B4J234 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV2A0A0B4J234 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC15.09■□□□□ 0.01
TRAV2A0A0B4J234 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV2A0A0B4J234 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV2A0A0B4J234 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV2A0A0B4J234 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV2A0A0B4J234 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV2A0A0B4J234 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV2A0A0B4J234 AL162377.1-201ENST00000618844 1793 ntBASIC15.08■□□□□ 0.01
TRAV2A0A0B4J234 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
TRAV2A0A0B4J234 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0.01
TRAV2A0A0B4J234 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
TRAV2A0A0B4J234 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
TRAV2A0A0B4J234 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV2A0A0B4J234 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV2A0A0B4J234 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV2A0A0B4J234 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC15.08■□□□□ 0
TRAV2A0A0B4J234 DET1-207ENST00000564406 2315 ntTSL 2 BASIC15.08■□□□□ 0
TRAV2A0A0B4J234 PPP1R14BP2-201ENST00000426284 444 ntBASIC15.08■□□□□ 0
TRAV2A0A0B4J234 NME6-213ENST00000451657 871 ntTSL 2 BASIC15.08■□□□□ 0
TRAV2A0A0B4J234 AC097658.1-201ENST00000475555 843 ntBASIC15.08■□□□□ 0
TRAV2A0A0B4J234 AC091874.3-201ENST00000512672 1195 ntBASIC15.08■□□□□ 0
TRAV2A0A0B4J234 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC15.08■□□□□ 0
TRAV2A0A0B4J234 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC15.08■□□□□ 0
TRAV2A0A0B4J234 AC104771.1-201ENST00000603335 964 ntBASIC15.08■□□□□ 0
TRAV2A0A0B4J234 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV2A0A0B4J234 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV2A0A0B4J234 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC15.08■□□□□ 0
TRAV2A0A0B4J234 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
TRAV2A0A0B4J234 KRT8P20-201ENST00000423953 1409 ntBASIC15.08■□□□□ 0
TRAV2A0A0B4J234 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV2A0A0B4J234 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV2A0A0B4J234 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC15.08■□□□□ 0
TRAV2A0A0B4J234 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV2A0A0B4J234 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV2A0A0B4J234 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV2A0A0B4J234 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRAV2A0A0B4J234 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV2A0A0B4J234 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV2A0A0B4J234 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV2A0A0B4J234 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV2A0A0B4J234 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRAV2A0A0B4J234 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV2A0A0B4J234 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 10.8 ms