Protein–RNA interactions for Protein: A0A0A6YYK1

TRAV8-1, T-cell receptor alpha variable 8-1 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-1A0A0A6YYK1 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
TRAV8-1A0A0A6YYK1 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV8-1A0A0A6YYK1 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV8-1A0A0A6YYK1 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV8-1A0A0A6YYK1 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
TRAV8-1A0A0A6YYK1 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC15.17■□□□□ 0.02
TRAV8-1A0A0A6YYK1 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC15.17■□□□□ 0.02
TRAV8-1A0A0A6YYK1 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV8-1A0A0A6YYK1 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
TRAV8-1A0A0A6YYK1 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC15.17■□□□□ 0.02
TRAV8-1A0A0A6YYK1 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV8-1A0A0A6YYK1 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV8-1A0A0A6YYK1 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV8-1A0A0A6YYK1 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC15.17■□□□□ 0.02
TRAV8-1A0A0A6YYK1 AC010141.2-201ENST00000452426 721 ntBASIC15.17■□□□□ 0.02
TRAV8-1A0A0A6YYK1 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV8-1A0A0A6YYK1 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV8-1A0A0A6YYK1 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC15.17■□□□□ 0.02
TRAV8-1A0A0A6YYK1 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV8-1A0A0A6YYK1 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV8-1A0A0A6YYK1 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV8-1A0A0A6YYK1 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV8-1A0A0A6YYK1 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV8-1A0A0A6YYK1 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV8-1A0A0A6YYK1 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
TRAV8-1A0A0A6YYK1 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
TRAV8-1A0A0A6YYK1 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
TRAV8-1A0A0A6YYK1 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC15.17■□□□□ 0.02
TRAV8-1A0A0A6YYK1 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV8-1A0A0A6YYK1 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
TRAV8-1A0A0A6YYK1 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV8-1A0A0A6YYK1 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV8-1A0A0A6YYK1 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
TRAV8-1A0A0A6YYK1 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
TRAV8-1A0A0A6YYK1 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
TRAV8-1A0A0A6YYK1 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV8-1A0A0A6YYK1 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV8-1A0A0A6YYK1 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC15.16■□□□□ 0.02
TRAV8-1A0A0A6YYK1 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC15.16■□□□□ 0.02
TRAV8-1A0A0A6YYK1 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC15.16■□□□□ 0.02
TRAV8-1A0A0A6YYK1 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC15.16■□□□□ 0.02
TRAV8-1A0A0A6YYK1 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV8-1A0A0A6YYK1 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC15.16■□□□□ 0.02
TRAV8-1A0A0A6YYK1 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV8-1A0A0A6YYK1 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC15.16■□□□□ 0.02
TRAV8-1A0A0A6YYK1 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV8-1A0A0A6YYK1 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV8-1A0A0A6YYK1 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC15.16■□□□□ 0.02
TRAV8-1A0A0A6YYK1 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV8-1A0A0A6YYK1 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
TRAV8-1A0A0A6YYK1 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV8-1A0A0A6YYK1 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV8-1A0A0A6YYK1 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
TRAV8-1A0A0A6YYK1 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV8-1A0A0A6YYK1 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV8-1A0A0A6YYK1 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV8-1A0A0A6YYK1 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC15.15■□□□□ 0.02
TRAV8-1A0A0A6YYK1 AC008406.3-201ENST00000620001 1374 ntBASIC15.15■□□□□ 0.02
TRAV8-1A0A0A6YYK1 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV8-1A0A0A6YYK1 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV8-1A0A0A6YYK1 AL136967.2-201ENST00000623968 743 ntBASIC15.15■□□□□ 0.02
TRAV8-1A0A0A6YYK1 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC15.15■□□□□ 0.02
TRAV8-1A0A0A6YYK1 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV8-1A0A0A6YYK1 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV8-1A0A0A6YYK1 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV8-1A0A0A6YYK1 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
TRAV8-1A0A0A6YYK1 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC15.15■□□□□ 0.02
TRAV8-1A0A0A6YYK1 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV8-1A0A0A6YYK1 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV8-1A0A0A6YYK1 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC15.14■□□□□ 0.01
TRAV8-1A0A0A6YYK1 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV8-1A0A0A6YYK1 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV8-1A0A0A6YYK1 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV8-1A0A0A6YYK1 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
TRAV8-1A0A0A6YYK1 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC15.14■□□□□ 0.01
TRAV8-1A0A0A6YYK1 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV8-1A0A0A6YYK1 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV8-1A0A0A6YYK1 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV8-1A0A0A6YYK1 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV8-1A0A0A6YYK1 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV8-1A0A0A6YYK1 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV8-1A0A0A6YYK1 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC15.14■□□□□ 0.01
TRAV8-1A0A0A6YYK1 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV8-1A0A0A6YYK1 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC15.14■□□□□ 0.01
TRAV8-1A0A0A6YYK1 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV8-1A0A0A6YYK1 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV8-1A0A0A6YYK1 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC15.14■□□□□ 0.01
TRAV8-1A0A0A6YYK1 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV8-1A0A0A6YYK1 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
TRAV8-1A0A0A6YYK1 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
TRAV8-1A0A0A6YYK1 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC15.14■□□□□ 0.01
TRAV8-1A0A0A6YYK1 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV8-1A0A0A6YYK1 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV8-1A0A0A6YYK1 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
TRAV8-1A0A0A6YYK1 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV8-1A0A0A6YYK1 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV8-1A0A0A6YYK1 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV8-1A0A0A6YYK1 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC15.13■□□□□ 0.01
TRAV8-1A0A0A6YYK1 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC15.13■□□□□ 0.01
TRAV8-1A0A0A6YYK1 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms